Polyodon spathula (Mississippi paddlefish): 121295268
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Entry
121295268 CDS
T07273
Name
(RefSeq) AF4/FMR2 family member 2-like isoform X1
KO
K15194
AF4/FMR2 family member 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pspa03021
]
121295268
Transcription machinery [BR:
pspa03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
121295268
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AF-4
AFF4_CHD
AF4_int
THD_CWZF3-5-7
Ig_TMEM132_4th
Motif
Other DBs
NCBI-GeneID:
121295268
NCBI-ProteinID:
XP_041075650
LinkDB
All DBs
Position
20:425786..553680
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AA seq
1255 aa
AA seq
DB search
MDLFEFDFFRDWELEQQCHYEQDRNALKKKEWERRTQEVQQDEDLFSSGFNLFGEPYKTE
ASSQSTLGGTYNPVQVLKTNKGDALANRVQNTLGNYDEMKDLLTNHSNQSHLVGIPKNSV
PQTPVEKTEQQSFFPEAQRSRLAPSTSMPLPPPSSSSSGPLTSSSLLHAYQSSKKSRSSD
WSRGGQSGQAIGQQCSQTKHSSCSHEPPQRGCEELCSSRGDLHKGDSSPAASSSHSRRHT
HSSRSAAGDHAYKESTHSKSPMELDFSSHCSNSPVPSTSLISSGLSTPNFPPALHSKPSM
VQQKPTAYVRPMDGQDQVPNDSPELKPTMEIGDTYSNPPFGGLLEGKASSMNTKSKLPKL
TLPPSGEVSLSNDPSCVEEILREMTHSWPPPLTAIHTPGKAEQTKFPIPSKEPQHLPSGH
NGPKHSDAPNKAATKPVPQKSMLEDDLKLSSDDEDSEQTAEKTKPRSTPVNLPVPPTRTA
ESGHSSGTSGSSSESESSSESDSDSESSSSSSECNEGSRSATPEPEPPSTNKWQLDKWLN
KVTPHNKALINSQTEGQVLASAQSEDSRQNEGPGQGKGKASEGLPQPEIKERALLSPIRE
RAKPRTGQKTLEGKSGKLKTPVQVDLAPPRRTTGKKQPLKVERAPSVEEYNWPKPNNPSS
TPKEKEPPPLEQPKARSKGGKTAPRKEQRSNTAAAPPPDKKKHRGVSKIVPKSKEFIETE
SSSSECHSDQEDVVKVPAPCMGLSITGSSLKPKDCSSNSLSVSSTSIDPASSDLPDENFF
SPAPMVQNELLSPLREFEEIKSLWVKIELSFLSRIPGQDPPDPDPVKPEPRDANLKHRRQ
TPASTAPEKPPSKSKRKHKSENSDALSGNKKLRLEKSSALLPPCISPIHNHKPASTKDSS
KQQPRKREAKLLPPPLSPLSDEPLHSESSSLSQENSTSSSSSHKHRKGDSKPAAHTKAVS
QEEPPLSRSSSSFPGNRQTEPDLWSTLSPVLTEPRRPKLTFDDTLHNADYYMQEAKKLKH
KADALLEKFGKAVNYADGALSFIDCGNAMERDPLEAKSPYTMYSETVELIRYAMRLKNFT
GKSSTVADKKLSVLCYRCLSLLYLRMFKLKKDHAMKYSRSLMEYFKNSVKSSQAPSPWGG
NGKSTDTPSPTSLSPSPVSSVGSSVGTGGSSSSSGSIAIPQRIHHMAASHVNITNNILRS
YEHWDTADKLSRESREFFQELDSVMEPLTQHSSMTSLVRYVRQGLHWLRIEAHLL
NT seq
3768 nt
NT seq
+upstream
nt +downstream
nt
atggacctattcgagtttgacttctttagggattgggaactggagcaacagtgccattac
gagcaggaccgcaatgcactgaagaagaaggagtgggaacgacgcactcaggaagtgcaa
caagatgaggatctcttctcctctgggtttaatctgtttggagagccgtacaagacagag
gcgtcaagtcaatccactttgggggggacctacaatccagtccaggttttaaagacgaac
aagggagacgccctagcgaaccgcgtccagaacacactggggaactatgatgagatgaag
gacctgctgaccaaccactccaaccagagccacctggtgggcatccccaagaactctgtc
ccacagacccccgtggagaagacggagcagcagagcttcttccccgaggcccagaggagc
aggctggccccatccacttccatgccccttcctcccccctcctcctcctcttccggcccc
ctcaccagctcctcgctgctgcacgcttaccagagcagcaaaaagtcccgctcatcagac
tggtcccgaggcggacagtcgggccaggccattggtcagcaatgcagccaaacaaagcac
agtagttgttcccacgagccgccccagagagggtgtgaggaattgtgtagcagccggggc
gacttgcataaaggggactccagcccggccgcttcctcttcccactccaggagacacact
cactcctccaggtccgctgcaggagatcacgcctacaaggaaagcacacactccaagtca
cccatggagctggacttcagctcccactgttcaaactctcccgtcccttcaacgtctctc
atttccagtgggctttccactccaaacttcccgcccgctctgcactccaagcccagcatg
gtccagcagaagcccactgcctatgtcaggccgatggatggccaagaccaggtccccaac
gactcccccgagctcaaaccaaccatggaaatcggggatacctatagcaacccgcctttc
ggaggcttgctggaggggaaagccagctcaatgaatacaaagagcaagctgccaaagctg
actttacctccgtctggggaggtcagcctttcaaatgaccccagctgtgttgaagaaata
ctgcgggagatgacccactcatggccgccgccattgacagcaattcacactcccggaaaa
gcagagcagaccaagttccccattccatccaaggagccccagcatctcccctccggacac
aacggaccaaaacacagcgatgctcccaacaaggctgcaaccaagcctgtgccacagaag
tcaatgctggaggatgatctgaagctcagcagcgatgatgaagacagcgagcagactgca
gagaagaccaagcctagaagcactcctgtaaatctccccgtgcctcccacacgcacagct
gagtcaggacactcgagcggcacctcgggaagctccagcgagtcagagagcagctcggag
tcggactcggacagcgagagcagctccagctccagcgagtgcaacgagggctcccgcagc
gccacccccgagccagagcctccatccacaaacaagtggcagctagataagtggttgaat
aaagtgaccccccacaacaaggctctgatcaacagccagactgaaggccaggtgctggcc
agcgctcagtccgaggacagtcggcagaatgagggaccaggccagggcaaggggaaggcc
agcgaggggctgcctcagcctgagatcaaggagcgggccttgctcagccccatcagggag
agagccaagccccggacaggccagaagaccctggagggcaagagcggcaagctcaaaacc
ccggtacaggtggacctggcccctccccggagaaccactgggaagaagcagcccctgaaa
gtggagagggcccccagcgtggaggaatacaactggcccaaacccaacaaccccagctcc
acgccaaaagagaaggagccaccgcccctggagcaacccaaagccaggagcaaggggggc
aagactgccccgcggaaagagcagaggtccaacacggcagcggcacctcccccagacaag
aagaagcacaggggggtgagcaagatcgtccccaagtccaaggagttcatcgagactgaa
tcatcttcttcagagtgccattcagaccaggaggatgtggttaaagtccctgctccctgc
atggggctgagcatcaccggcagctctctcaaacccaaggactgcagcagcaatagcctg
agcgtcagcagcacttcaatagacccagccagcagtgacttaccagatgagaacttcttc
tcccccgcccccatggtccagaatgaactgctgtctcccttgagggaattcgaggagatt
aagtcactgtgggtgaaaatcgagctaagttttctgtctcggatacccggacaggacccc
ccagatccggacccggtgaagcctgagcccagggacgccaacctgaaacaccggcggcaa
actccagcttcgacggcccccgagaaaccccccagcaaatccaagaggaaacacaagtct
gagaattcagatgcacttagtggcaataagaagctacggttagagaagtcctcagcgttg
ctccccccttgtatttctccaatccacaaccacaagcccgccagcactaaagactcctcc
aagcagcagcccaggaaacgtgaggcgaagctgctgcccccccctctgtctccgctatcc
gacgagcccctccacagtgagagcagctccttgagccaggagaacagcacctcctcctcc
tcctcgcacaagcaccgcaagggagacagcaagcccgccgcgcacaccaaggccgtgagt
caggaagaaccacctcttagcaggtcctccagcagtttccctggcaacaggcaaacagag
cctgacctttggtctaccctatcgccagtgttgacggagcctcggaggccaaaattgacg
tttgacgacacccttcacaatgcagactactatatgcaggaagccaagaaattaaagcac
aaagctgatgcactgttggagaagtttggcaaagccgttaattatgcagacggcgccctg
tccttcatcgactgtgggaacgcgatggaacgagacccattagaagccaagtctccgtac
accatgtactctgaaacagtggagctcatcaggtatgcaatgaggttaaagaacttcaca
ggaaaatcttctacagtagctgataagaagctgtctgttttatgttatcggtgtttatcg
cttctctacttgagaatgtttaaactgaagaaggatcatgcaatgaagtactcccgctcc
ctcatggaatatttcaagaactctgtgaagagctcccaagcaccgtcgccctgggggggc
aatgggaaaagcacagacaccccatcgcccacgtctctgagcccctctccggtcagctct
gtgggcagcagcgtgggcaccgggggctcctcctcttcctcgggcagcatcgccatcccc
cagcgcatccaccacatggccgccagtcacgtcaacatcaccaacaacatcctgcggagc
tatgagcactgggacactgccgacaagctgtcccgcgagagccgagagttctttcaggag
ctggactcagtgatggaaccactgacccaacacagcagtatgaccagcctggtccgctat
gtcaggcaaggactgcactggctccgtatagaggctcacttattatag
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integrated database retrieval system
