Polyodon spathula (Mississippi paddlefish): 121295290
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Entry
121295290 CDS
T07273
Name
(RefSeq) transmembrane channel-like protein 6 isoform X1
KO
K21988
transmembrane channel-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121295290
03037 Cilium and associated proteins [BR:
pspa03037
]
121295290
Transporters [BR:
pspa02000
]
Other transporters
Pores ion channels [TC:
1
]
121295290
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121295290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
Motif
Other DBs
NCBI-GeneID:
121295290
NCBI-ProteinID:
XP_041075687
LinkDB
All DBs
Position
20:complement(27365782..27382688)
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AA seq
837 aa
AA seq
DB search
MTEMARSVNFHLDLPEAEEVQQFLGFSPYDENIVHDSFNELIEEQSHSQGGSAVFEMEDM
AGRGTENPAFLASPLHGRGNREERQKEEPLLSENFSPVTLRVLSAMPSRTIGRNRGAIIS
QYYNRTMKLRRRRSRPSIQDQSHSSRPSICGHQVETDPEAAGEEENRQHLFDNLQNLSVS
DRGRMLKTMPLSLLEKKNLRHACNSKGVPHSRNQIPCCSWLKYYLIIGFRNGRYSLLSFL
HSLQLWHVALKKVSGRFGTGVLSYFVFLKTLLLFNVFLLLVNVVFLAVPQVAHPPSGQTH
RLPFQGLELLTGAGYFTDTVLYYGYYINSTVNGCGPARNGSGCAVGLNSLDTRMPYNIPL
AYFFTIVISFFITCILLVYSMSKSFGQSYRIDNPHGDLAMKVFCSWDFKVIKKSSVKRQC
ENICTQMKELLSELARASGQQTLQQRLARMTVHLLAWVMSLGSTVACAMGIYYFSTYMHK
DLTKRVSRNETLIQVEVSLLALPVVVSTVNLLMPGLFNAAAWMEQYDAPSTQAYVAICRN
LLLKMSVLGVLCHHWLGTTISGHVTLSKQVQQYGSTGGLECWETLVGQELYRFLLMDFIF
TVLDTIFGEFVWRLFSQKVLKRKRKPVFDIARNVLELIYGQTLTWLGVLFSPLLPAFQII
KLVLLFYIKRTSLMMNCQAPSKPWRASQMTTIFITLLCFPSFLGVAVAVTYTIWKIKPSE
GCGPFRTLNTMFESGNIWVRQLEEMNSNFSWLTWIHKYLVENPFFLFAAVGALLIVIYFH
MQVVDAQRKIISLLEEQIDNEGEDKRFLITRLQDIYMKKLPSSSAHVAHCSKDDSRK
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgacggagatggcccggagcgtcaacttccacctcgacctccctgaagccgaggaggtg
cagcaattcctgggcttctctccatacgacgagaacatcgtccacgactccttcaatgag
ctgatagaggagcagagccacagccagggtgggtctgccgtcttcgagatggaagacatg
gctggcagggggacagaaaacccagccttcctggcatctccgctacacggccgcggcaac
agggaggagagacagaaggaggagccgctgttgagtgaaaacttctccccggtcaccctg
agagtgttgtctgccatgccgagccgcaccatcggccgcaatcgcggagcaatcatctcg
cagtactacaaccgcacgatgaaactgcgaaggcgacgaagccggccctccatccaggac
cagtctcactcttcccggcccagcatctgtggacaccaagtggagacggacccagaggca
gcaggggaggaagaaaatagacaacacctgtttgacaacctgcagaacctctctgtgagt
gatagggggcgcatgctgaaaaccatgcccctcagcctgctggaaaagaagaatctgaga
catgcctgcaattcgaagggggttccccactccaggaaccagataccctgctgcagttgg
ctcaaatactacctcatcatcggttttcgcaacggcaggtacagcttgctctccttcctg
cactctctgcagctgtggcacgtggccctgaagaaggtgagcgggcgcttcggcactggc
gtcctctcctacttcgtcttcctcaagacgctgctgctcttcaacgtcttcctcctcctc
gtcaatgtcgtcttcctcgcagtccctcaggtagcccacccgcccagcggccagacccac
cgcctccccttccaggggctggagctgctcaccggggctggctatttcacagacacggtt
ctgtactatggttactatatcaactccactgtgaacggctgtggtccagctcgcaatggc
tctgggtgcgccgtgggtctgaacagcttggacacccgcatgccctacaacattcccctc
gcgtacttctttaccatcgtgatctccttcttcatcacctgcatccttctggtctacagc
atgtccaagtccttcgggcagagctaccgcattgacaaccctcacggggatctcgccatg
aaggtgttctgttcctgggacttcaaagtaattaagaagagctccgtgaagcgccagtgt
gagaatatctgcacacagatgaaggagctgctgtctgagctggctcgggcatcgggacag
cagactctgcaacagaggctggcaaggatgacggtgcacttgctggcttgggtcatgtct
ctggggagcaccgtggcatgtgccatgggcatctactacttctccacatacatgcacaag
gacctgaccaagagggtgtctcgtaacgagaccctgatccaggtggaggtgagcctgctg
gccctgcccgtggtggtgtccacagtgaacctgcttatgccgggcctcttcaatgcggcc
gcgtggatggaacagtacgatgcacccagcacacaggcctacgtcgccatctgcaggaac
ttgctgctgaagatgtctgtgctgggagtcctgtgtcaccactggctaggaacgaccatc
agcggtcatgtgactctgtcaaaacaggttcagcagtatggctctactgggggactggag
tgctgggagaccctcgtgggtcaggagctgtaccgtttcttgctaatggatttcatcttt
acagtcttggacaccatcttcggggagtttgtctggaggttgttttctcagaaagtgctc
aagaggaaaagaaagcctgtgtttgatatcgccaggaacgtgctggagctcatatacgga
cagactctcacctggctaggagtgctcttctcaccattgcttcctgctttccagattatt
aaactggttcttttattttacattaaaagaaccagcctgatgatgaactgccaggctccc
agcaagccttggagagccagtcagatgaccaccatctttatcaccctcctgtgcttccca
tcattcctaggggtggctgtggctgtcacctacaccatttggaaaataaagccctcggag
gggtgcggaccctttaggacgctgaacaccatgttcgagtcggggaatatctgggttcgg
cagctggaggaaatgaattccaatttctcctggttaacctggattcacaagtacctggtg
gagaatcccttcttcctgttcgctgctgtcggtgctctcttaattgtgatttatttccac
atgcaggttgtggatgcacagaggaaaataatctctctgttagaagagcaaatcgataac
gagggagaggataagagattcctgatcactcgcctgcaggatatttacatgaagaaactg
ccctcttcatctgcccacgtcgctcactgcagcaaggatgacagtcggaaatga
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