Polyodon spathula (Mississippi paddlefish): 121295291
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Entry
121295291 CDS
T07273
Symbol
tmc8
Name
(RefSeq) transmembrane channel-like protein 7
KO
K21988
transmembrane channel-like protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pspa02000
]
121295291 (tmc8)
03037 Cilium and associated proteins [BR:
pspa03037
]
121295291 (tmc8)
Transporters [BR:
pspa02000
]
Other transporters
Pores ion channels [TC:
1
]
121295291 (tmc8)
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121295291 (tmc8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TMC
BDV_P40
Motif
Other DBs
NCBI-GeneID:
121295291
NCBI-ProteinID:
XP_041075690
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All DBs
Position
20:27382757..27391639
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AA seq
770 aa
AA seq
DB search
MEEEGQDCLDYSRTVSNEGSESCFLDPSYCYHQTEIFSELPSQKTLRKRPVQDSSPRVSG
EGSESHRAETVSANSSRDRGWDLLKDDRRPLRNYPLSIAEKRHMRETRRSWSGQISWWLS
WKQSQLTSWRRFRENLANAFQDLKPWKGPLREIEGKFGTGVKSFFTLLHCLIYLNLVSCV
FIAGLVVVPTALLRSELLDVNETSTHRTGECNSSGISDKKPFYSHIKDFFLGSGFMKDSY
LFYGFYPGAGLSQHSYNIPLMYLLCSVGILFLSLLWVVTRLGRDYKVRWMQGRQYKTLLS
FKIFAGWDFCIRETESATLKQSRIRNDLKMDLDEEQYHQRVSERTVKQRALLCLIRVVLN
LIVLTLLAGAFFVIYQATQVSQKYQQFSESYSFLIEYLPSLSITLINFLLPQVFRRLVKF
EDYLLTTQINLTLFRCVFLKLSSLGMFLFSLYQQIFCSGNLENPKCKTCRYNCDYQCWET
KVGQEIYKLLLFDFLACIGTTFLLDYPRKVLVEKCSWRLVQFIGKDRFIVPLNVLNIVYS
QTLTWTGLFYCPLLPLLNCVMLFLMFYIKKFSLYNCQPAKRMFRSSSSSVFFQCVLLLGL
LLALVSVGVSIFISCCSQVCGPFQRYNLSFEVVAACINTLPGVAQRALYYILSEAFAIPL
IISECILLTFYVSLVRAHQGTIEELKEKLVMDVTDKRFLVKKLSALAKKYKGELDRNIST
DSSGDGPSREGPVDPCGFRPAMSRPGHSKESGGGPRSTPARRINEKMNLV
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggaggaagagggccaggactgtttagattactcacgtacggtctcgaatgagggttca
gagtcctgtttcctggatccctcctactgctaccaccaaacagagatcttctctgagctg
cccagccaaaaaaccctgaggaagaggccagtgcaagacagcagcccccgagtgtctgga
gaggggtcggagagccacagggcagagacagtcagcgccaattccagccgggataggggc
tgggacctcctgaaagacgacaggcgcccactccgaaactacccgctcagcatcgctgag
aagaggcacatgagggagacgcgtcgatcctggagcggccagatcagctggtggctgtca
tggaaacagagccagctcacctcctggcgccgtttccgcgaaaacctggcgaacgcgttt
caggacctgaagccatggaaggggccactccgggagattgagggaaaatttggcactgga
gtgaagtcgttcttcaccttgcttcactgcctcatctatctcaacctggtttcctgcgtt
ttcattgctggtcttgttgtggtgcctactgccctgctgagatcagagttgctagatgtg
aacgagaccagcacccacagaacaggggaatgcaacagcagtggtataagtgataagaaa
cccttctactcacacattaaggatttctttttgggatctggttttatgaaagactcctac
ctattctatgggttttacccaggggctgggttgtcccagcactcctataacatccccttg
atgtacctgctctgctcggttgggatcttgttcctcagtctgctctgggtggtgacaagg
ttggggagagattacaaggtgcggtggatgcagggccgacagtacaagaccctgctgagc
ttcaagatctttgccggctgggatttctgcatccgggagacagaatcggccacactgaaa
cagagcagaatcaggaacgacctcaagatggacctggatgaggagcagtatcatcagcgc
gtctccgagcggacggtgaagcagcgggctctgctctgccttatcagagtcgtcctcaac
ctgattgtgctcacgctgctcgctggagccttctttgtcatctaccaagccacgcaggtg
tcccagaaataccagcagttctcggagtcctacagctttctgattgaatacctgccatcc
ctgtccatcaccctgatcaacttcctgctgccccaggtgttccgcaggctggtcaagttt
gaggattacttgcttaccacccagatcaacctgaccctcttcaggtgcgtctttctcaag
ctgtccagcctggggatgttccttttctccctctatcagcagatcttctgctctgggaac
ttggagaatcccaaatgcaaaacctgcagatacaattgcgattaccagtgctgggagacg
aaggtggggcaggagatatacaaactgttgctgtttgattttctggcctgcatcgggacc
acgttcctccttgactacccaagaaaggttctggtggagaagtgctcatggcggctggtc
cagttcattggaaaggatcgcttcatcgtccccttgaacgtgctgaacatcgtctatagc
cagaccctcacctggacaggcctgttctactgccccctgctgcccctgctcaactgtgtc
atgctgttcctcatgttctacatcaagaagttcagcctgtacaactgccagccagccaag
agaatgttccgctcgtccagctcctctgtgttcttccagtgtgtgctgcttttggggctc
ctcctggcactggtctctgtcggagtcagcatcttcataagctgctgttcccaagtctgt
ggtccatttcagcggtataacctgagctttgaggtggtggcagcctgcatcaacactctc
ccaggagtcgctcagagagctctctattatatcctgtcagaggcctttgccatccccttg
atcatctccgaatgcattctgctgaccttctacgtttccctggtcagagcgcaccaaggc
actattgaagaactgaaagagaagctggtcatggatgttactgataaacgattcttggtg
aagaagctctcagctttggccaaaaagtacaaaggtgagctggacagaaacatctcgaca
gacagcagtggagacggcccttcaagggagggcccggtggacccctgtggcttccgacct
gcaatgagccgcccgggacacagcaaggagtctgggggggggcccagaagtacaccagca
agaagaataaatgagaagatgaaccttgtgtag
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