Polyodon spathula (Mississippi paddlefish): 121295315
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Entry
121295315 CDS
T07273
Name
(RefSeq) methionine--tRNA ligase, mitochondrial-like
KO
K01874
methionyl-tRNA synthetase [EC:
6.1.1.10
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa00450
Selenocompound metabolism
pspa00970
Aminoacyl-tRNA biosynthesis
pspa01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
121295315
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
121295315
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
pspa01007
]
121295315
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pspa03016
]
121295315
Enzymes [BR:
pspa01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.10 methionine---tRNA ligase
121295315
Amino acid related enzymes [BR:
pspa01007
]
Aminoacyl-tRNA synthetase
Class I (U)
121295315
Transfer RNA biogenesis [BR:
pspa03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
121295315
Prokaryotic type
Other AARSs
121295315
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_1g
tRNA-synt_1
tRNA-synt_1e
Anticodon_3
Anticodon_1
Motif
Other DBs
NCBI-GeneID:
121295315
NCBI-ProteinID:
XP_041075726
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All DBs
Position
20:5965531..5969825
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AA seq
618 aa
AA seq
DB search
MHWIIIKMSLYRHCLIKSMNCMVSRSDFSRLLHRKSALRCRTFSSLVSSRTSFDLGRSPA
RESQPNKDYYYITTPIFYVNAAPHMGHLYSAVIADCLHRYKQMRGFTSKFSTGTDEHGLK
IQQAADAAGKYPLNFCTEVSEKFKSLFQSSQISYTDYIRTTGEQHRRAVEHFWTVLYDKD
FIYKGEYEGWYSTPDESFLTESQVADSKDKNGKHIKVSLESGHQVEWMKEENYMFRLSEF
RPALLQWLRENPRAVRPTKFYNIALQWLQEDLPDLSVSRQRDRLKWGIPVPGDPGQTIYV
WLDALVNYLTVAGYPDGHCQWWPAARHVVGKDILKFHAIYWPAFLMAAGVPLPQAIYVHS
HWTVSGQKMSKSLGNVVDPLERSQQYTVDGLRYFLLRQGVLDTDCDYYDDKVIKLLNSEL
ADSLGGLLNRCTAPSINHEQVYPSFCGLCFPKENVRGSPEGRAAPEDYRLVESVSRLSAE
FERHFENLQIYKALETVSHCVRQTNGFFQRHAPWKLDRNNPQERRWLDTILHVAMECLRV
YGTLLQPVVPMTADVLLSRLSVEPSRRGWEDLNFLNRYQGENCPFEGRTLGSDTGILFSR
LDRTEKAECKPKKSKKVK
NT seq
1857 nt
NT seq
+upstream
nt +downstream
nt
atgcattggatcataattaaaatgagtctttatcgccactgcttaataaaaagcatgaac
tgcatggtatcaagaagtgatttctccagactgctccacaggaagagtgcactgcgctgc
agaactttctcctcgctggtttccagtcggaccagtttcgatttaggccgttcacctgcg
cgagagagtcaacccaataaagactattattacatcaccactccaatcttctatgttaac
gcagctcctcacatggggcacttgtactctgccgtcatagcggattgcctgcaccggtac
aagcagatgcgtggcttcacctcaaagttttccacaggaacagatgagcatggtttaaaa
atccagcaagctgcagatgccgctgggaaatatcccctgaatttctgtacagaagtatct
gagaagtttaaatctctgttccaaagctctcagatctcctataccgactacatcaggacc
acaggagagcagcatcgcagggcagtggagcacttctggacggtcttgtatgacaaagac
tttatttacaaaggggagtatgagggctggtattccaccccagacgagagtttcctgaca
gaatcccaggtcgctgactctaaggacaaaaatgggaaacatattaaggtttctctggaa
agcggtcaccaggtagagtggatgaaggaggagaactacatgttccgcctgtcagaattc
agacctgcactgctccagtggctcagagagaaccccagagctgtgcgccccacaaagttc
tacaacatcgccctccagtggctgcaggaagatctgcctgatctttcagtgtcccgccaa
agagaccgcctgaagtggggtatcccagtcccaggtgaccctgggcagacaatatacgtg
tggctggatgctttagtcaactacctcactgtggcaggctaccctgatgggcactgtcag
tggtggccggcagcccgtcacgtggtaggcaaagacatcctcaagttccacgcaatatac
tggccagctttcctcatggctgccggtgtgcctctccctcaggctatttatgtacattct
cactggacagtcagtgggcagaagatgtcaaaaagtctggggaatgtggtggatccctta
gagaggtcccaacagtatacagtagatgggcttaggtatttccttctaaggcagggagtc
ctggacacagactgcgactattatgatgacaaggtaatcaaacttctcaactctgagctg
gcagactccttggggggtcttctgaaccgttgcaccgctccaagcattaaccatgagcag
gtatacccctctttctgtggtctttgcttcccgaaggaaaatgtgcggggttcccctgaa
ggaagagcagctcctgaggactacaggttggtggagtcagtctctcggctgtcggcggag
tttgaacgccactttgaaaacctccagatctacaaggccttggaaactgtcagccactgt
gtccgacagaccaacggtttctttcaaaggcacgcaccctggaagcttgataggaacaac
ccccaggaacggcgctggctggataccatccttcacgttgctatggagtgcctgcgggtt
tatggcaccctcttgcagccggtggtgcccatgacggcggacgtgctcctctcccggctt
tcggtggagcccagcagaaggggctgggaggacctgaacttcctgaacaggtaccaggga
gagaactgtcctttcgaaggacggactttgggttctgacactggcatcctatttagcaga
ctagacaggacggagaaagctgaatgcaaaccaaagaaatcaaagaaagtgaaatga
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