Polyodon spathula (Mississippi paddlefish): 121295327
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Entry
121295327 CDS
T07273
Name
(RefSeq) transforming growth factor beta activator LRRC32-like
KO
K26316
transforming growth factor beta activator LRRC32
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
121295327
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Motif
Pfam:
LRR_8
LRR_4
LRR_1
LRR_LRWD1
LRR_EndoS
LRR_5
LRR_9
Motif
Other DBs
NCBI-GeneID:
121295327
NCBI-ProteinID:
XP_041075747
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All DBs
Position
20:complement(1143662..1147414)
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AA seq
723 aa
AA seq
DB search
MLQGYRTHSHVALTQNTPDRMTPSILIWILVLNCACFPSTCGSSSEQYANQSICHKRRFQ
ELSCSSLNLSSVPNCLEPGLKKLDLSNNFIRTLNEESAASLQSLQELDLSFNRFDLLTRR
AWRNLIQLQSLNLAGNNLDSNRKRNSAALQSLKSLKVLDLSQNNLDSDTSALYLKNMSSL
EHLGLAGNKLTTLSSKLFHQSPNLESISLADNIIVEINKGTFESLKRLRVLNLAFNSLRC
ISDFQLKHLLTLNLSRNSIEFFVTSENEDMYQLETLDLSYNRLLYFPLLPKNNALQYLYL
QNNEMGLLTLGSAFSEVRILYQEITRIDTPNSKLYSNTTFTNLVHLDLSNNLFTSFPFHF
LHDLIALQHLNLSNNCLENFTLEESDAETQATAEQPSPLFQQHRRLPSMQTLDLHNNLIH
YLPPWFFELLPQIERVNLGKNSLQPCAIPNSFTSNGAALQNVSHNDDCVDFSGLGTLKHL
DLRENNIAVLFPRMFHQTPLVSLDLAGNTHLRIAANALDSLASTLQELSVSGNLMINSDL
PLPCLKELRRLDLSNNLLGTLPPQIRCSPLVEIDVRNNSLTGLDVPAVTCWSRSLQTIQL
SRNSFNCCTLHWLRIMQESKADIGDLEDAMCFYQQNYTLAVALTRDHSQECPAGAAAETT
LLLGLIILAVLLITAAVVIGKIKYQKPGTSVKLKSNKVVSFEYTQDIDCGPKVAKLNIFE
TET
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atgctccagggctacagaacccacagtcatgttgctcttacacagaacactccagataga
atgactccctcgatcctcatctggattctggtactgaactgcgcttgctttccctccaca
tgtggctccagcagtgaacagtatgcaaaccagagcatctgtcacaagcgcagatttcag
gagctgtcttgttcctctctcaatctttcatctgttccaaattgcctggaacccggactt
aaaaaactcgatctgtccaacaactttatcagaactctcaacgaggaatccgcagcaagc
ctacaatcgctgcaagagctggatttaagttttaaccggttcgatctattaacccggaga
gcttggagaaacttgatacagcttcaaagtcttaatcttgcaggaaacaacctggacagt
aacaggaaaagaaacagcgcagccttgcagtcgctgaagagcctgaaagtgctggatctg
tcccagaacaatctggacagcgatacgtcggctctgtatctgaagaacatgtcctcgctg
gagcaccttggcttagccggaaacaaactgacaacgctttcttcaaaattattccaccaa
tcccccaacctggagagcatcagcttggcagataacatcattgtggaaatcaacaaggga
acctttgagagtctgaagagactcagggtgttaaacctggccttcaactcactgcgctgc
atctccgattttcaactgaaacacctgcttaccctgaacctcagcagaaactccattgag
ttctttgtgacgagtgaaaatgaagacatgtatcaacttgaaactttggaccttagttat
aacaggctactttactttcccctgctccccaaaaataatgctttacaatatctgtattta
cagaacaatgaaatgggtttacttacacttggatctgcattttcagaagtgagaattctg
taccaagaaatcacaagaatagatactcccaacagcaagctttattcaaacacgacattt
acaaacttggttcacctggatttaagcaacaatctattcacgtctttcccgtttcacttt
ttacacgacctgattgctcttcagcaccttaacctcagcaacaactgccttgaaaacttc
actttggaagaaagtgatgcagaaacccaagcgacagctgagcaaccatctccactattt
cagcagcacaggcgtctcccatccatgcagacactggatctgcacaacaatctaatccac
tatctgcccccttggttctttgagctcctaccccagatagaacgagtgaatctggggaaa
aacagcttgcaaccctgtgccatccccaattctttcacaagcaatggagctgcattgcaa
aacgtgagccataatgatgactgtgtggacttctctggtttaggaactctgaagcacctg
gatctgcgtgaaaataacattgcagtgctgttccctcgcatgtttcaccaaactccttta
gtttctctggaccttgctggtaatacgcaccttaggatagctgctaatgctcttgacagc
ctggcgtccacgctgcaggagctgtccgtcagtggcaacctgatgataaactctgattta
cctctgccttgtctcaaagagttaagaaggctggacctgtccaacaacctcctgggtact
ctacctccgcaaatcagatgctccccactggtggagatcgatgttcggaacaattccttg
accgggctagatgtgccagcagtcacctgctggtctagaagtcttcagaccatccagtta
agcagaaactctttcaattgttgcacactgcattggctgaggatcatgcaggagtctaag
gctgacatcggcgatctggaggacgctatgtgtttctatcagcagaattacacgcttgca
gtagctttaacaagggaccattcacaagagtgtccagctggggcagcggcagaaacaaca
ctcctactaggcttaataatcctagccgttctgcttataacagctgctgtcgttattggt
aaaataaagtaccagaaaccaggcacttctgtgaaacttaagagtaacaaagtggtgtct
tttgaatatactcaagacatcgactgtggtcctaaggtggctaaactcaatatatttgaa
actgagacttga
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