Polyodon spathula (Mississippi paddlefish): 121295368
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Entry
121295368 CDS
T07273
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate-like isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03250
Viral life cycle - HIV-1
pspa04144
Endocytosis
pspa04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121295368
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121295368
04145 Phagocytosis
121295368
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121295368
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
121295368
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
ELMO_ARM
UIM
FYVE_CARP1-2
Cnd1
Motif
Other DBs
NCBI-GeneID:
121295368
NCBI-ProteinID:
XP_041075823
LinkDB
All DBs
Position
20:25160523..25173288
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AA seq
754 aa
AA seq
DB search
MGKGGGAFERLLDKATSQLLLETDWESILQICDLIRQGDAQAKYAIGAIKKKLNDKNPHV
ALYALEVLESVVKNCGQTVHDEVANKQTMEELKDLLKSEPSVRNKILYLIQAWSHAFRNE
PKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKHHC
RACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCYEQLNKKAEGKAAGSSELPPEYLTSPL
SQQSQVVVGGSMPPKRDEAALQEEEELQLAIALSQSEAEEKDRMVCRQKPTYSVYPKADP
TPVTSSAPPVSTLYTSPVNSSAPAAEEIDPELARYLNRTYWEKKQEEVRKSPTPSAPVPV
AEPVPISQPVEAHPAPPINIVEQQYQNGESDENHEQFLKALQNAVTTFLNRMKSNHMRGR
SITNDSAVISLFQSINNMHPQLLDLLNQLDERRLYYEGLQDKLAQVRDARGALNALRDEH
REKLRCAAEEAERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIQRLQEQEKERQMRLEQQK
QTIQMRAQMPAFSLPYAQLQSLPAAGGMMYQPSGPTSYPGSVEGSPMHTVYMNQPAQSGT
ALYPGIPVSSTDPNMVNAYMYQPGASTGQTTQQGQAVPTTNPGYSNYQPTPTQGYQTVPT
QSQNIPPISQPPQSNGIGYMGPQSVPMGYQPYNLQNMMSALPGQDPNMPPQQPYIPGQQP
MYQQMAPPGGPQQQQQMQQQQHGGGGEAQLICFD
NT seq
2265 nt
NT seq
+upstream
nt +downstream
nt
atgggaaagggaggaggcgcgtttgaaaggcttcttgataaagccaccagccagctgctc
ctggagacggattgggaatccattttgcagatatgcgacctgattcgtcaaggagatgcc
caagctaaatatgctattggtgccatcaagaagaaactcaatgacaagaaccctcatgtg
gccctttatgctttagaggttctggagtctgttgtaaagaactgtggccaaacagtgcac
gatgaggtggcaaacaagcaaactatggaggaactgaaggatcttcttaagagtgaacca
agcgtacggaacaagattctctacctaatccaggcctggtcacacgccttccgcaacgag
cccaaatacaaagtggtccaggatacctaccagatcatgaaggtggaaggtcatgttttc
cccgaatttaaagagagtgatgccatgtttgcagctgagagggctcctgactgggttgac
gcagaggagtgccaccggtgcagagtgcagttcggggtcatgacaagaaagcatcactgt
cgggcatgtggacagatcttctgtgggaagtgttcctccaagtactccaccatccccaag
tttggaatagagaaggaagtccgggtctgtgaaccctgctatgaacagctcaataaaaaa
gctgaaggcaaggctgctggctcttcggagctgccccccgagtacctaaccagcccgcta
tctcagcagtcacaggtagtggttggtggctcaatgcccccgaaacgtgacgaggctgcc
ctgcaggaggaggaggagcttcagctcgctattgccctgtcccagtctgaggccgaggag
aaggatcggatggtctgtaggcagaagcccacatattcagtgtacccgaaagctgaccct
accccagtgacatcatcagccccgccagttagcactctgtacacttctcctgtgaactct
tctgctccagctgctgaagaaatcgatccagagcttgcacgctacctgaacaggacctac
tgggaaaagaagcaggaggaggttcggaagagccccacaccttccgcccctgtgcccgtg
gctgagccagtcccaatcagccagcctgtggaggctcacccagcacctcctatcaacatt
gtggagcagcagtaccagaacggggagtcagacgaaaatcacgagcagtttctgaaggca
ctgcagaatgctgtcaccaccttcctcaatcgcatgaagagcaaccacatgaggggccgc
agcatcaccaacgacagtgctgtgatctccctcttccagtccatcaacaacatgcacccc
cagctgctggacctgctcaaccaactcgatgagaggcgattgtactacgagggtctacag
gacaagctggcacaggtccgagatgcccgcggggctctaaatgctctacgggacgagcat
cgtgagaaactgcgctgtgctgctgaggaggctgagcgccagaggcagatccagctcgct
cagaaactggagatcatgaggcagaagaagcaggagtacctggagatgcagaggcagcta
gcaattcagcggctgcaggaacaggagaaggagagacagatgcggctggagcagcagaaa
cagaccattcagatgagggcccagatgccagccttctctctgccctacgcacagttgcag
tcgctgcccgctgccggggggatgatgtaccagccctctggccccaccagttaccctggc
tcagtggagggctcgccaatgcacactgtctacatgaaccagccagcacagtctggcact
gcgctgtacccaggaattcctgtgtctagcactgacccaaacatggtgaatgcgtacatg
taccagccaggagcctccactgggcagacaactcagcagggccaggctgtgcccaccaca
aacccaggctactccaactaccagccgacacccacacagggataccagactgtgccaacc
cagtctcagaatattcctccaatatcccagcctccccagtccaatgggatagggtacatg
gggccacagtctgtgcccatgggataccagccctataacttgcagaatatgatgtctgcc
ctgcctggccaggaccccaacatgcctccgcagcagccctacataccgggtcagcagccc
atgtaccaacagatggctccccctgggggcccacaacagcaacagcagatgcaacagcag
cagcatggaggaggtggggaggcacaactgatctgctttgactga
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