Polyodon spathula (Mississippi paddlefish): 121295407
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Entry
121295407 CDS
T07273
Name
(RefSeq) glypican-4-like
KO
K08110
glypican 4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121295407
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pspa00535
]
121295407
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
121295407
Proteoglycans [BR:
pspa00535
]
Cell surface proteoglycans
Glypican family (GPI-anchored HSPG)
121295407
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
pspa00537
]
Others
121295407
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SSDB
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Gene cluster
GFIT
Motif
Pfam:
Glypican
Motif
Other DBs
NCBI-GeneID:
121295407
NCBI-ProteinID:
XP_041075911
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Position
20:complement(3520983..3547646)
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AA seq
551 aa
AA seq
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MAGINALVWASAVLVWVAVCAELKPKTCTEVRLAYGSKGFNYNDVPHQGVNGAQLKVCPQ
GFTCCTPEMEEKLSQQSRTDLRAPVTQLSSNLQSTFTQRHRRFDQFFKELLDNAERSLHD
MFTRTYGVMYVQNAELFKQFFQDLKRYYVSGGVDLEQMLSEFWAGLLERMFKLVNVQYHF
TEEYMECVSKHTEQLKPFGDVPRKLKLQVTRAFVAARTFAQGLDVIGDVVSKVSAVNASP
DCVRAAMKMMYCPYCSGQVALKPCPNYCLNVMKGCLANQADLDTEWNNVMDAMLNLAERL
EGPFNIEAVMDPIDVKISDAIMNMQENSMQVSQKVFQGCGQPRPAVPDRVSRSAPDGGFN
ARFRPYNPEERPTTAAGTSLDRLVPDVKKHLKLAKKFWSTLPESVCTGERISAGDECWNG
TAKSRYDSVVMGNGLANQVANPDVEVDITKPDLVIRRQIMVLRLMTNRLKSAHNGHDVTF
FDMSEDGSGEESGSGCEGQHCTSDFVFTPTITKIPPVIARSGEVSGAVSLPLISFVLLLG
AAALAILAPRR
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atggctgggatcaacgcgctggtttgggcttctgcagtgctggtttgggttgcggtgtgt
gccgagctgaaacccaaaacgtgcaccgaagtcaggctcgcctacgggtcgaaggggttt
aattacaatgacgtcccacaccaaggagtgaacggtgcccagttgaaggtgtgcccgcag
ggcttcacatgctgcacccctgagatggaggagaagctgagccagcagagccgcactgac
ctccgagccccagtgacccagctgagctccaacctgcagagcaccttcacacagcgccac
cgccgctttgaccaattcttcaaggagctgctggacaatgccgagcgctccctgcacgac
atgttcacccggacgtacggagtcatgtacgtgcagaacgcagagctcttcaagcagttc
ttccaggacctgaagcgctactacgtgagcggcggggtggacctggagcagatgctgtcc
gagttctgggctgggcttctggagcgcatgttcaagctggtcaatgtccagtaccatttc
acagaggagtacatggagtgtgtcagcaagcacactgaacagctcaagcccttcggagac
gtgcctcgcaagctcaaactgcaggtcacgcgcgcctttgtggcggcaaggactttcgct
caggggcttgacgtcattggagacgtggtcagcaaagtgtccgcggtgaacgcctctccg
gactgcgtgagagccgccatgaagatgatgtactgtccctactgcagcgggcaggtggcg
ctcaaaccctgccccaattactgcctcaacgtgatgaagggatgcctggcgaaccaggcc
gacctggacacagagtggaacaatgtcatggatgccatgctgaacctggcagagagactg
gagggccccttcaacattgaggctgtgatggaccccattgacgtcaagatctcggacgcc
atcatgaacatgcaagaaaacagcatgcaggtctcccagaaggtgttccagggatgtggg
cagcccaggcctgctgttccagatcgcgtctcacgctcggctcctgatggtgggttcaat
gccaggttccgaccctacaacccggaggagaggcccactactgcagcgggcaccagcctc
gacagactggtccctgatgtgaagaagcacctcaagctggcaaagaagttctggtccacg
ctgccggagagtgtgtgcacgggagagcggataagcgcaggagacgagtgctggaacggc
accgcaaagagcaggtacgattcggtggtgatgggaaatggtttagccaaccaggtggcc
aaccccgatgtggaggttgacatcaccaagccggacttggtgattcgccggcagataatg
gtgctgcgcctgatgaccaacaggctgaagagcgcccacaacgggcatgacgtcaccttc
tttgacatgagtgaggatggcagtggggaggagagtggcagcgggtgtgagggccagcat
tgtacgtccgatttcgtcttcacccccaccatcaccaagatccctccggtgattgcaaga
tcgggtgaagtttcgggggcagtcagtctgcctctgatcagctttgttttgctgctggga
gctgcagctctggccatactagcccctcggagataa
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