Polyodon spathula (Mississippi paddlefish): 121295416
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Entry
121295416 CDS
T07273
Name
(RefSeq) lysosome-associated membrane glycoprotein 2-like isoform X1
KO
K06528
lysosomal-associated membrane protein 1/2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03272
Virion - Hepatitis viruses
pspa03273
Virion - Lassa virus and SFTS virus
pspa04140
Autophagy - animal
pspa04142
Lysosome biogenesis
pspa04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
121295416
03272 Virion - Hepatitis viruses
121295416
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
121295416
04142 Lysosome biogenesis
121295416
04140 Autophagy - animal
121295416
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121295416
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121295416
04090 CD molecules [BR:
pspa04090
]
121295416
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Others
Lysosomal membrane proteins
121295416
Autophagy
Chaperone mediated autophagy (CMA)
Cargo receptors
121295416
Other autophagy associated proteins
RNautophagy/DNautophagy
121295416
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of hepatic cells
121295416
CD molecules [BR:
pspa04090
]
Proteins
121295416
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lamp2-like_luminal
Lamp2_2nd
Psg1
Methyltrn_RNA_4
VAS1_LD
Motif
Other DBs
NCBI-GeneID:
121295416
NCBI-ProteinID:
XP_041075927
LinkDB
All DBs
Position
20:complement(4604229..4617553)
Genome browser
AA seq
419 aa
AA seq
DB search
MYSCIGLAFVLLLGCGVLQSDATVAEVLDEKNKTCIYAEMMVNFTVQYETSNSTPSTAEF
VLPTNVTTAGSSCGNETVAPFLKISFGNGHYWSINFTHSNTSYHGDVFIFGYNVSDSTIF
HNASQKGVIKVVANDTMPPVPMDHYYRCMSDNVFKQGNVTQTFWNVSIQAYIRDGNRSKD
ATVCSADTPTTVAPVTNITTVAPVTNVTTAAPTVTPKPTPTPKPDKETYKVFRGNETCLI
ITMGLQFNYSTTAQAPWEVKNIEPNVTTASGACGGNTSTIILNERDTVYLVFSFATRSSK
TFYLKGVNVTTVVNGSAQQLGINNNLSYWEATLGSSYMCNKDQVFKVTDKLYINTYDLRV
QPFNVTNGKYSTAEDCSSDKENYIVPIAVGVALAVLVIVVLVAYLIGRSQNRGAGYEQF
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtacagctgcattggcctagctttcgttctgcttttaggctgtggagtcctacagtct
gatgcaactgtagcagaagttttagatgagaaaaataagacatgcatctacgctgaaatg
atggtgaatttcaccgttcaatatgagaccagcaattctacacctagcactgcagaattt
gtcctgccaacaaatgtaacaacagcaggaagcagctgtggcaatgagacagtcgcccct
tttttaaaaatcagttttgggaatggccactattggagcattaacttcacacatagcaat
acttcgtaccatggagatgtatttatctttggctataatgtcagtgacagcaccatcttt
cataatgcctctcaaaaaggtgttatcaaggttgtggccaatgacacaatgccacctgtg
cccatggatcactactacagatgtatgagcgataacgtttttaagcaaggcaatgtcacc
cagaccttttggaatgtcagtattcaagcgtacattagagatggaaatcgaagtaaagac
gccactgtgtgtagtgctgataccccaacgactgtagctccggtgactaatataacgact
gtagctccagtgactaatgtaacaactgcagctcccaccgttactccaaaaccaactcca
acccccaaaccagataaggaaacatacaaggttttcaggggcaatgagacatgcctgatt
atcaccatgggactgcagttcaactacagcaccactgcccaggcgccgtgggaagtgaag
aacattgaacccaatgtaaccactgcgtcaggagcctgtgggggcaacacctccaccata
atactgaatgagagggacaccgtttatcttgttttctccttcgctacacgcagttcaaag
acattctatcttaaaggagtgaatgtaaccacagtggtcaatggctctgcacaacaactt
ggaattaacaacaatctaagttactgggaggcaaccctgggcagctcctacatgtgcaac
aaggaccaggtgttcaaggttaccgacaagctctacatcaacacttatgatctgagggtg
cagcctttcaacgtgaccaacggaaaatattctacagctgaagattgctcttctgataaa
gaaaactacattgtgcccatagcggtcggagtagccctggcagttctcgttattgtagtg
ctggtggcatatcttattgggaggagtcagaatcgcggcgctggatatgagcagttctaa
DBGET
integrated database retrieval system
