Polyodon spathula (Mississippi paddlefish): 121295432
Help
Entry
121295432 CDS
T07273
Name
(RefSeq) protein transport protein Sec24D-like isoform X1
KO
K14007
protein transport protein SEC24
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
121295432
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121295432
Membrane trafficking [BR:
pspa04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
121295432
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
Gelsolin
Motif
Other DBs
NCBI-GeneID:
121295432
NCBI-ProteinID:
XP_041075971
LinkDB
All DBs
Position
2:complement(33346950..33389265)
Genome browser
AA seq
1021 aa
AA seq
DB search
MSQQGYIATPPYSQTQPLYGHYGGSPQTFAPPQQVLKTAASVGPPVSGMPPPPGPNQFGL
GNQQNGFNAAGAQPQRFISNTAVGGQPPLSPYGQPLPTTYQNSAPPLSTQQLTNQMGAMQ
LSGYGPGAMQGSQLPPSLAAQPIFPQPMAHPPMTPGSHAPQMTLSTPTIGPPSMGTMPPG
PPVGVQGGFPGPNPVNASFQQPPGQVHPHGFPQQPGSFGGQMTGPQPGFPGAFPGGTAQM
AGPQQKKLDPDSIPSTTQVIEDDKVRRGGQTYTTNTRGQVPPLVTTDCLVQDQGNASPRF
IRCTTYSFPCTADLAKQCQVPLAAVIKPLATVPHNETPLYLVNHGETGPIRCNRCKAYMC
PLMQFIDGGRRYQCSFCSCVNEVPPFYFQHLDHVGRRLDHYERPELSLGSYEFIATLDYC
KNNRPANPPAFIFMIDVSYSNIKSGLVKLICEELKTLLGKLPREEQAEKSVIKVGFVTYN
KILHFYNVKSNLAQPQMLVVSDVSEMFVPLLDGFLVDFQESQSVINNLLDQIPEMFADTN
ESETVFAPVIQAGMEALKAAECSGKLFIFQSSIPTAEAPGKLKNRDDRKLVNTEKEKTLF
QPQKGVYESLVKECVANSCCVDLFLFPNQFVDVATLGDIPMHTGGSLYKYNNFQIQSDGH
HFLSDLRKDVEKRIGFDAIMRVRTSTGFRATDFFGAIYMNNTTDVEMAAVDCDKAVTVEF
KHDDKLSEDTGALMQCALLYTTVGGQRRLRIHNLGLNCSSQLADLYKSCETDALINFFAK
TAYRAMLNQPLKTVREILVNQTAHMLACYRKHCASPSSASQLILPDAMKVFPVYMNCLMK
SYPLVGSPEISIDERAYQRQLVMSMDVADSQAFFYPRLIPVHNIDVNSDVMPSAVRCSEE
RLSEGGIFLLENGKHMFLWLGLTSPPEAIQSIFNVPSFAHINTEATTLLELDNPYSKKLR
SIIDNIHRQRPHSMKLMIVKQKDKPEMIFRQFLVEDKGLYGGASYMDFLCYVHKEIRQLL
T
NT seq
3066 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaacaaggttacatcgcaactccaccttactctcagactcagcctctctatggc
cactatggtggctcaccacagacattcgctccaccacagcaagtgctgaaaacagctgcc
tctgttgggcctccagtgtctggcatgcctccacctcctggcccaaatcagtttggcctg
ggtaatcaacagaatgggtttaatgcagcaggagctcagccacaaagatttatttctaat
acagcagttggtggccagcctccactttcaccatatgggcagccactaccgacaacctat
caaaattctgcccctcccttatccacacagcagctgacaaatcagatgggagccatgcaa
ttaagtggatatggacctggtgcaatgcagggttctcaactaccccccagcttagcagca
cagccaatattcccacagccaatggcacatcctcctatgactccaggatctcatgcccca
caaatgaccctgtccaccccaacaatcggcccaccttccatgggcacaatgcctccaggt
cctcctgttggggtgcagggtggttttcctgggcccaatccagtgaatgctagttttcag
cagcctccaggacaagttcatcctcatggattcccccaacagccaggttcattcggaggg
cagatgacaggacctcagccaggctttcctggagcttttccagggggcacagcacaaatg
gctggtcctcagcagaaaaaactggatcctgactctattcccagcacgacccaagtcatt
gaggatgataaagtacgaagaggaggacagacctacaccacaaacaccagggggcaagtt
cctccccttgtcaccacagattgtttggttcaagatcaaggaaatgcaagtcctcgtttt
attcgatgcacaacatactctttcccttgcacagctgatctagcaaaacaatgtcaagtt
cctctggcagcagtcataaagcccttagcaacagttccacataatgagactcctctgtac
cttgtgaaccatggagagaccgggcccataagatgtaatcgctgcaaggcttacatgtgt
ccactaatgcagtttattgatggtggtcgcagataccagtgttctttctgcagctgtgtt
aatgaagtaccaccattctatttccaacatctggaccatgttggcaggagattggaccac
tatgagaggccagagctatcactgggatcttacgaatttattgctactttagattactgc
aagaacaacaggcctgcaaaccctcctgcctttatcttcatgattgatgtgtcgtacagc
aacattaagagtggcctggtcaaattgatatgcgaggaactgaaaacactgctgggtaaa
cttccgagggaggagcaagcagagaagtctgtaattaaagttggatttgttacctacaac
aagattctccacttctacaatgtaaagagcaacttggcccagccccagatgttggtggtt
tcagatgtgtctgagatgtttgtgcctctgcttgacggctttcttgtggactttcaagaa
tcacaatcggttatcaacaatctcttggaccagattccagagatgtttgctgacaccaat
gagagcgagactgtttttgcccctgtcatccaggctggcatggaagcattgaaggctgca
gagtgcagtggcaaactcttcatcttccagtcatccattcccacagctgaagcacctggg
aaactgaagaacagggatgacaggaagctggtgaacacagagaaagaaaagaccctgttc
caaccccagaagggtgtttatgagagtctggtcaaggagtgtgtggcaaacagctgctgt
gttgacctgttccttttccctaaccagtttgtggatgtggccacactgggtgacatccca
atgcatacaggaggatccctttacaaatacaacaacttccagattcagtctgatggccat
cattttttgagtgacctaagaaaagatgttgagaaaaggataggatttgatgcaatcatg
cgggtccggacaagcacaggattcagagcaactgatttttttggtgccatatatatgaac
aacaccacagatgttgagatggcagcagtggactgtgataaagcagtaactgtggagttc
aaacatgatgacaagctcagtgaggatactggagccttaatgcagtgtgctttgctgtac
acaactgttggtggccaaagacgactgcgtatccacaacctgggtttgaactgcagctcc
cagcttgctgacctatataagagttgtgagacagatgcccttatcaatttctttgccaaa
acagcctacagagccatgttgaaccagcctctgaagacagtgagagagatcctggttaat
cagactgcacacatgctggcctgttacaggaagcactgtgccagcccctcctcagccagc
cagctgattcttccagatgctatgaaagtctttccagtctacatgaactgcctgatgaag
agctatcccctggtgggtagcccagaaatttctatagatgaaagagcttatcagagacag
ttggtgatgtccatggatgttgctgattcccaggctttcttctacccaaggcttatacct
gttcacaacattgatgtgaacagcgatgtgatgccctctgctgtccgatgttcagaagag
cgcctgtctgagggaggaatcttcctacttgagaatggcaagcatatgttcttgtggctg
gggctgacctcccctccagaggccattcagagcatcttcaatgtaccttcatttgcacat
attaacacagaggcaacgacacttctagagctggacaacccctactcgaaaaagctcagg
tcaattattgacaacatacaccgccagaggcctcattcaatgaagctgatgattgtgaag
caaaaagacaaaccagagatgattttcagacagttcctggtagaagacaaaggtctttat
ggaggagcttcctacatggattttctatgctatgttcataaagagatcagacaactactc
acctaa
DBGET
integrated database retrieval system
