Polyodon spathula (Mississippi paddlefish): 121295467
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Entry
121295467 CDS
T07273
Name
(RefSeq) nuclear pore complex protein Nup85-like
KO
K14304
nuclear pore complex protein Nup85
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121295467
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121295467
03036 Chromosome and associated proteins [BR:
pspa03036
]
121295467
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121295467
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
121295467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
TPR_19
Motif
Other DBs
NCBI-GeneID:
121295467
NCBI-ProteinID:
XP_041076035
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All DBs
Position
20:complement(29567429..29573871)
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AA seq
475 aa
AA seq
DB search
CFDPSLSLALTVPVALLLLQVICYVLQGRMDEARQMLAKQASQQPAARSMFKTLDSLMKK
MPVFNPAGSQTLTEFDLKWRHWHEECELHLQDGSFSSNSNLETICKILLGHEETLLNQKE
QLSTWYHLLVSRLLYTHPSVKPTELHYYAQSSMDLFLDNRSAPEPLDSILLAAFEFDIHQ
VIKDCSIALSNWWFVAHLTDLLDHCKLLQSHNLHFGSNLREFLLLEYASGLFTHHSLWQL
AVDYFDHCPEFGRIYLELQIERVPLDTERKALKVLRICEQRQLAEQVRSICKIMAKKAVR
NNRLGSALSWSIRAKDAAFATLISDRFLQDYCARGTFSDLDLIDNLGSAMLLSDRLTFLG
KYREFHKLYGEKRFAEAAKLLLSLMTARIAPRSFWMTLLTDALPLLEQKQVIFSADQTYE
LMHCLEELTSGKTEPSDKCTVQEEDIETTKVELLRLALARNLAAAIVKEGTVDSL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
tgcttcgatccctctctctctcttgccctgaccgtgcccgttgctctgttgttgctgcag
gtgatctgctacgtgctgcagggacggatggatgaggccaggcaaatgctggccaagcag
gcaagccagcagccagcagccagaagcatgttcaaaaccctggacagcctcatgaagaaa
atgccagtcttcaatccggctggcagtcagacgctgacggagtttgatttgaagtggagg
cactggcacgaggagtgtgagctgcacttgcaggatgggtccttcagctccaactccaac
ctggagacaatctgcaagattcttctaggtcatgaagagactctgctgaaccagaaggag
cagctttccacttggtaccacctccttgtgagcagacttctgtacacacacccctctgtg
aaacccacagagctccactactacgcacagtccagcatggatttgttcctggataaccgg
agtgcccctgagccgctggacagcatcctcctggctgccttcgagtttgacattcaccag
gtcatcaaggactgcagcattgctctcagtaactggtggtttgtagcccatttgacagac
ctgctggaccactgcaaactcctgcagtcccacaaccttcactttggctccaatctgaga
gagttcctcctcttggaatatgcgtcggggctgttcacacatcacagcctgtggcagctg
gcagtggattacttcgatcactgcccggagtttgggaggatatacctggagctgcaaatc
gagagggttcccctggacacagaacgcaaggccctcaaggtgctgcggatctgtgagcag
aggcagctggcagagcaagtgcgcagcatctgcaagatcatggcgaagaaagccgtgcga
aacaaccggctgggctcggcgctgtcctggagcatccgagctaaagacgctgccttcgcc
accctcatctccgacaggtttctgcaggattattgtgctcggggcaccttctctgacctg
gacctcatcgacaatctggggtctgccatgctgctcagcgaccggctcaccttcttaggg
aagtaccgcgagttccacaagctgtacggagagaagaggttcgctgaggctgccaagctg
ctgctgtcgctcatgacggccagaattgccccccgtagcttctggatgaccctccttact
gatgcactgcccctgctggagcagaaacaggtgatattttcagcagatcaaacgtacgag
ctgatgcactgcctggaggagctgacgtcaggcaagactgagcccagtgacaaatgtacc
gttcaggaggaagatatagaaaccaccaaagtggagcttctccgccttgcgttggcacgg
aacctggctgcagccatcgtaaaggaggggacagtggactccttataa
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