Polyodon spathula (Mississippi paddlefish): 121295486
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Entry
121295486 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase Siah2-like isoform X1
KO
K08742
E3 ubiquitin-protein ligase SIAH2 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121295486
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121295486
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121295486
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
121295486
NCBI-ProteinID:
XP_041076082
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All DBs
Position
20:6141189..6154930
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AA seq
364 aa
AA seq
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MSRPSSAGGGGGGLGAGKAGGGKHGVSAGAAAAAAAAVAAAAAAAAAAAAAAAAGVAGSA
AGSGSVTPAAAAALPTTGLPCQAAELTALFECPVCFDYVLPPILQCQAGHLVCNQCRQKL
SCCPTCRGPLTPSIRNLAMEKVASTLPFPCKYASAGCLLSLHHSEKPEHEEVCEFRPYTC
PCPGASCKWQGSLEAVMPHLMHAHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGHH
FMLVLEKQEKYEGHQQFFAIVLLIGTRKQAENFAYRLELNGNRRRLTWEATPRSIHDGVA
SAIMNSDCLVFDTSIAHLFADNGNLVLSFSSPPWNTEPPTVACRQTNCSRSCKTEFVNCW
KVGL
NT seq
1095 nt
NT seq
+upstream
nt +downstream
nt
atgagccggccgtcctctgcgggcggcggaggcggaggactaggggccgggaaagcaggg
ggtggaaagcacggtgtctctgctggggcagctgccgctgctgcagctgcagttgctgcc
gccgctgctgccgccgccgccgccgcggctgcagcagctgctggagtggctggatcagcg
gccggatcaggctcagttactccggctgccgctgctgctttgcccacgacaggcctcccg
tgccaagccgcagaactcactgctctttttgagtgcccggtgtgttttgattacgtgctg
ccaccgatcctgcaatgccaggccgggcacctagtgtgcaatcagtgccgacaaaagctg
agctgttgcccaacctgtcgcgggcctcttacccccagcatcaggaacttggccatggag
aaagtggcttccactctcccgttcccctgcaagtatgcctcggctggctgcctgctgtcc
ttgcaccacagcgagaagccggagcatgaagaggtgtgtgagttccggccatacacctgc
ccctgcccgggggcctcctgcaagtggcagggctcgctggaggcggtcatgccccacctg
atgcacgcccacaagagcatcaccactctgcagggcgaggatatcgtcttcctggccaca
gacatcaacctgccaggggccgtcgactgggtcatgatgcagtcatgcttcggccaccac
ttcatgctggtgctggagaagcaggagaaatacgagggccaccagcagttcttcgccatc
gtgctgctaattgggacccgtaaacaggccgagaactttgcctaccgcctggaactcaat
gggaaccgccgccggctgacgtgggaggccacgcctcggtccatccacgacggcgtggct
tctgctatcatgaacagcgactgcttggtctttgacacctccattgcccacctctttgca
gacaatggcaacctggttttgagtttcagcagtccaccatggaatacagaaccgccgact
gttgcatgccgtcagacaaactgttccagatcatgcaagacagaatttgtaaactgctgg
aaagtgggattgtaa
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