Polyodon spathula (Mississippi paddlefish): 121295490
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Entry
121295490 CDS
T07273
Name
(RefSeq) plastin-3 isoform X1
KO
K17336
plastin-3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pspa03400
]
121295490
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pspa04812
]
121295490
04147 Exosome [BR:
pspa04147
]
121295490
DNA repair and recombination proteins [BR:
pspa03400
]
Eukaryotic type
Check point factors
Other check point factors
121295490
Cytoskeleton proteins [BR:
pspa04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Others
121295490
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
121295490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CH
EF-hand_7
EF-hand_1
EF-hand_6
EF-hand_5
EF-hand_8
EF-hand_FSTL1
EF-hand_EFHB_C
SPARC_Ca_bdg
Motif
Other DBs
NCBI-GeneID:
121295490
NCBI-ProteinID:
XP_041076088
LinkDB
All DBs
Position
20:15857060..16371010
Genome browser
AA seq
684 aa
AA seq
DB search
MKYSKHPGPTCWRWNNQTFFKPASTSDQWNPFQLETFRQIKGSLSVLETHHGTFLTEMAG
KISKDELEELREAFEKVDLNGNGFVCDYELQELFKEANLPMPGYKVREIIQKLMTEGDKD
KDGKISFDEFVSIFQELKSSDIAKSFRKAINRKEGILAIGGTSELSSEGTQHSFSEEERY
AFVNWINKALENDPDCKHVLPMNPNTNSMFKAVGDGIVLCKMVNLSVADTIDERAINKKK
LTPFTIQENLNLALNSASAIGCHVVNIGALDLREGKPHLVLGLLWQIIKIGLFADIELSR
NEALVALLRDGESLEDLLKLSPEELLLRWANYHLESAGWHKINNLSSDIKDSKAYFHLLN
QIAPKGTKEDEARIDINMSGFNEKDDLKRAEFLLQQADRLGCRQFVTPADVVSGNPKLNL
AFVANLFNKYPALTKPENQDIDWKLLEGETREERTFRNWMNSLGVNPHVNHLYSDLQDAL
VILQLYEKIKVPVDWNKVNKPPYPKLGANMKKLENCNYAVELGKRPAKFSLVGIGGQDLN
DGNATLTLALVWQLMRRYTLNVLEDLGEDGAKVNDDIIVKWVNSTLSAADKKTKIQSFKD
KEISTSLAVVDLIDAIQPGCIDYDMVKTGKLSDEDKQENAKYAVSMARKIGARVYALPDD
LVEVKPKMVMTVFACLMGRGLKKV
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgaaatattcgaaacacccaggacccacgtgttggcggtggaataaccagacattcttc
aaacctgcgagtacgtctgatcaatggaacccattccagttggaaacctttcggcaaatc
aaaggatcactctcagttttggaaacacaccacgggacctttttgacggagatggcgggc
aagatctcgaaggacgagctcgaagaactccgagaggccttcgagaaagttgatctcaac
gggaatggctttgtgtgtgactatgagctccaggaacttttcaaagaggctaaccttcca
atgccaggctataaagtccgggagatcattcagaagctgatgacggaaggagacaaagac
aaagacggcaagatcagcttcgacgaattcgtatccattttccaggagctgaagagcagt
gacatcgctaagagcttcaggaaggcaatcaacaggaaggaggggatcttggccatcgga
ggcacctcggagctgtccagcgagggcacacagcactccttctccgaggaggagcgatat
gcctttgtcaactggataaacaaggcattggagaatgatccagattgcaagcatgtcctt
cccatgaaccccaacaccaattccatgtttaaagctgttggtgatggcattgtgttgtgt
aaaatggtcaacctctctgtggcagacacgattgatgaaagagcaatcaacaagaagaag
ctgacaccattcacaattcaggagaatctgaacctggccctgaactctgcctctgcgatt
ggctgccatgtggtgaatatcggagccctggacttgcgtgaaggaaagcctcacctagtg
ctgggcctgctatggcagatcatcaagattggcctatttgcagacattgagctcagcagg
aacgaagctctggtggccctgctccgagatggggaaagtctggaggatctgctcaagctg
tcccctgaagagctgctcctgagatgggccaactaccacctggagagtgcaggctggcac
aagattaacaacctcagctcagacatcaaggattcaaaggcctatttccacctcctgaat
cagattgcacctaaaggaactaaagaggatgaggctcgcattgacatcaacatgtccggc
tttaatgagaaggatgacctgaagagggcggagttcctgctgcagcaggcggacagactg
ggctgcagacagttcgtcaccccagccgatgtggtcagtgggaacccgaagctaaacctg
gcatttgttgctaacctgtttaacaagtacccagccctgaccaagccagagaaccaagat
attgactggaaactactggaaggtgagacccgagaggagaggaccttccgcaactggatg
aactctcttggtgtaaatccacacgtcaaccacttatacagtgacctgcaggatgccttg
gttatcctccagctctatgaaaagatcaaggttccagttgactggaacaaagttaataaa
cccccataccctaaacttggtgccaatatgaaaaagctggaaaactgcaactatgcggtt
gaactgggtaaacgtcctgctaaattttccctggtgggtattggtggacaggacctgaat
gatggcaatgcaacattgaccctggctttggtgtggcagctaatgaggcgatacacactc
aatgtgctggaggacctaggagaagatggggccaaagttaacgatgacatcattgtaaag
tgggtcaactcgactctctctgcggctgacaagaaaaccaagatccaaagctttaaggac
aaagaaattagcacaagtttggctgttgttgacttgattgatgccatccagcctggttgc
attgactatgatatggtgaagacagggaagctttctgatgaagacaagcaagaaaatgcc
aagtatgctgtgtccatggcccggaagatcggggcccgggtgtacgccctgccggacgac
ctcgtcgaggtgaagcccaagatggtgatgacagtctttgcttgtttgatgggaaggggg
ctgaagaaggtgtaa
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