Polyodon spathula (Mississippi paddlefish): 121295527
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Entry
121295527 CDS
T07273
Name
(RefSeq) cysteine protease ATG4A-like isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04136
Autophagy - other
pspa04140
Autophagy - animal
pspa04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagocytosis
121295527
04140 Autophagy - animal
121295527
04136 Autophagy - other
121295527
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121295527
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121295527
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121295527
Peptidases and inhibitors [BR:
pspa01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
121295527
Membrane trafficking [BR:
pspa04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
121295527
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
121295527
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Peptidase_C54
Motif
Other DBs
NCBI-GeneID:
121295527
NCBI-ProteinID:
XP_041076189
LinkDB
All DBs
Position
20:complement(12602235..12618742)
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AA seq
406 aa
AA seq
DB search
MEAVRAQYETKINAISDLLEDLPDTDEPVWLLGEQYFVKTEKSELLSDIRSRLWFTYRKK
FCPIGGTGPCSDTGWGCMLRCGQMILAQALVYRHLGREWRWEKENCHPEEYHRILHCFLD
RKDCCYSIHQMAQMGVGEGKSVGEWYGPNTVAQVLKKLALFDEWNSLAVYVSMDNTVVIE
DIKTLCKLQPMKGQLKPSSSGQVEPQVMGSMHGQLNPQAQGIPGSHPGWKPLLLIIPLRM
GINHINPVYIEALKECFKMPQSLGVLGGKPNLAYYFIGFIGDELIYLDPHTTQAAVDPDF
DGTVDDQSYHCQRRPQRMKILNLDPSVAVGFFFKTEADFDRWCTFVQQEILKKRCLRMFE
LVEKHPPHWPPFIPPAKPEVQTTGAELVESMDKLFESEEEFEILNV
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggaagcagttagagctcagtatgaaactaagatcaatgccatctctgacctcctagag
gacctcccggacactgatgagccagtctggcttctaggagagcagtactttgtgaaaaca
gaaaaatctgagctgctgtctgacatcaggtcgagactatggtttacataccggaagaag
ttctgtccaatcgggggtaccggaccctgctcggacactggctggggctgcatgctgcgc
tgtgggcagatgatcttagcccaagccctcgtctacagacatttaggaagagagtggcgc
tgggagaaggagaattgtcaccccgaggagtatcacaggatcctgcactgtttcctagac
aggaaggactgctgctactccatccatcagatggctcagatgggggtaggagaggggaag
tcagtcggagagtggtatggaccaaacacagttgctcaagtgttaaagaagctagcacta
tttgatgaatggaattccttggctgtatatgtttccatggacaacactgtagtgattgaa
gatatcaaaacactgtgtaagctgcagcccatgaagggccagttaaagcccagcagctca
gggcaggtagagccccaggtaatgggcagcatgcacgggcagctcaaccctcaggctcag
gggatccctggctcgcacccaggctggaaaccactgttacttatcatacctctgcgcatg
ggcataaaccacatcaatcctgtttacattgaagctctgaaggagtgttttaagatgcca
cagtccttgggtgttttgggtggaaaaccaaaccttgcatattatttcattgggtttatt
ggagacgagttgatctatttagaccctcacacaacccaggctgctgtggatccagacttt
gatgggactgtggatgaccagagctaccactgccagcggaggccacagagaatgaaaatc
ctgaacctggacccctctgtggctgtaggattttttttcaagactgaagctgattttgac
aggtggtgcacatttgtacagcaggaaatcttaaagaaaagatgtctacgaatgtttgag
ctggttgagaagcaccctccccactggcctccattcatccctcctgctaaaccggaggta
cagacgacaggagcagaactcgtcgagtcaatggacaagctgtttgaatcagaagaagaa
ttcgaaatcctgaacgtatga
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