Polyodon spathula (Mississippi paddlefish): 121295533
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Entry
121295533 CDS
T07273
Name
(RefSeq) arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1-like isoform X1
KO
K18439
Arf-GAP with Rho-GAP domain, ANK repeat and PH domain-containing protein 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121295533
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121295533
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121295533
Endosome - Golgi transport
Arf GTPase associated proteins
121295533
Others
Rho GTPase associated proteins
Rho GTPase-activating proteins
121295533
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ArfGap
RhoGAP
PH
PH_6
Motif
Other DBs
NCBI-GeneID:
121295533
NCBI-ProteinID:
XP_041076207
LinkDB
All DBs
Position
20:4328589..4340329
Genome browser
AA seq
1014 aa
AA seq
DB search
MERSSAPQDQYNRYDGGVVIHTCRTCEPQYAKRQPRSRTRSLCQLSSVSDSMSKPVPPAG
QAYPVPKPRKRTQSTLSEQSTAPPVPQPRRKSLCSILDSEMPQLQVVSSNEESPHKPSSD
LSLDSQNKMSCDGIAKTHENPLISETDLQSNHRGDWRGVTEESGEGGVSSMCSASQEGTT
ESGQPKTQDSQPRSYPQHTPSMRVRRRKHRFADCQVTVVYQPREQKPRGGSVVCRSGWLE
VWQARRHKMMWVEFNGKTLSLFKKRTDKFTETVFPVSCITNVWAGEGGKFFVSTLKKHYE
FLAPRGRDGWVSSLGTPQKKATPEQIEQQGPLGLRELRTKVYAALRGHRLWVYHNKEDFR
EGVAMTAINMNVAQAKQTGRHSFDLTTPYKIFSFTADSSRELVAWLGSLSRAVKSALSCS
EVAERVWGSTWNRNCADCWSPDPEWASVNLLVVICDNCAGQHRAMGTAVSKVRSLKMDKS
VWTEPLIQLFILYGNKSANELWADQVPPAEQICPESSAEQRRAFIWAKYKQGRYRHLHPL
YRSQEQMHQRLCEVGMTADVSETLALLCSGARVSIHQGEPYQPSPISLAEQAGQAMQAEL
LRQNQFAEAPFQDIGVEPSPAETHSLQDTEEFHCKLDKDKLVFSEEVDSAPCEVLNLKDV
TSLFDCSTGQSHEFEMQILKERLQCTADNQETLRTHLQHIAKVLLPWPVPDSELAGVRCL
SRVTAREGKWPEHRDAWVALSGTQLLLYLTGGCQRDRLRLTLSQNYTFIATEKMFEIISP
ERTLSLQFEHSQPCEKWGVLLKDALQPPQSSSSLGGGSLYPSLCRGSTRVPDPIERCISY
ITQHGLTVEGIYRRCGQVGKISRLVEGLCSTPCRAQFEKGELGVVDVSGALKQCLKLHTA
LFPEPHLSHWLQSAGIPGQAERLLGYREVLEQLSDEQRGILSRLFGHLYQVQAYSQVNRM
TPENLALVFVPTLFPDHALSTDAVKLTRELITHYTALFHGGEEEGSAEDLFTIL
NT seq
3045 nt
NT seq
+upstream
nt +downstream
nt
atggaacgcagctctgccccgcaggaccagtataacaggtatgacggtggtgtcgtgatc
cacacctgtcgcacttgtgagccgcagtatgccaaacgacagccacggagccgtacacgg
tccctgtgtcagctcagttcagtgtccgacagcatgtccaaaccagtccccccagcggga
caggcgtaccccgtacccaaacctcgcaagcgcacccagagtaccctctcagagcagagc
acagccccccctgtccctcagcccaggaggaaatcactttgcagcattttagattctgaa
atgccgcagctacaagtagtgtccagcaatgaggaatctcctcacaaacccagctcggat
ttgtccctggatagtcaaaacaaaatgagttgtgatggaatcgctaagactcatgaaaac
cctttgatttctgaaactgatcttcaaagcaatcaccggggggactggcggggtgtgaca
gaggagtctggagaaggtggtgtgagctccatgtgttctgcttcccaggaggggacaaca
gagtcgggacagcccaagacccaagactcgcaacccaggtcatacccacaacacaccccc
agcatgcgcgtgagacgtcggaagcaccgctttgctgactgccaggtgactgtcgtctac
caacccagggagcagaagccacgaggaggcagcgtggtctgtaggtctggctggctggag
gtgtggcaggcaagaaggcacaagatgatgtgggtcgagttcaatggaaagacgctgtcc
ctgttcaagaaacgcactgacaagtttacagagacagtctttcctgtgtcctgcattact
aatgtctgggcaggagagggcggcaagttctttgtgtccacactcaagaagcattatgag
tttttggcacccagaggtcgtgacgggtgggtgagttctctgggaacccctcagaagaag
gcgaccccagagcagatagagcagcagggccccctgggtctgagagagctcagaaccaag
gtgtacgcagcgctgagggggcacaggctgtgggtctaccacaacaaggaggatttcaga
gaaggcgtggcaatgactgctatcaacatgaacgtggcccaggcgaagcagacaggcaga
cacagcttcgacctcaccaccccctacaagatattcagtttcacagcagattcttctcgg
gagctggttgcctggctgggctcgctgtcccgggctgtcaagagcgccctgtcctgcagt
gaggtggcggagcgtgtttgggggagcacgtggaatcgaaactgcgccgactgttggagt
cctgacccagagtgggcatctgtgaacttgctcgtcgtcatctgtgacaactgtgcaggt
cagcaccgtgccatggggaccgctgtctccaaggtacgcagtctgaagatggacaagagc
gtgtggacagagccactcatacagctgttcattctgtacggaaacaagtcagccaatgag
ctttgggcggatcaggtgccgcccgctgaacagatctgcccagaatcctctgcggagcag
cggcgggcgttcatctgggccaaatacaagcagggccgctaccgccacctgcacccactg
tacaggagccaggagcagatgcaccagcgtctgtgtgaggtggggatgactgccgatgtg
tcggagacactggccctgctgtgttccggggcacgggtgagcattcaccagggggagccc
taccagccgtcccccatctccctggcagagcaggcagggcaggccatgcaggccgagctg
ctgcgccagaaccagttcgcagaggcccctttccaagacattggggttgaaccttcccca
gcagagacccattctttacaagacactgaggagttccattgcaaactggacaaagacaag
cttgtgttctcggaggaggtcgactctgccccctgcgaggttctcaatctgaaggacgtc
acctcgctctttgactgctccacagggcaaagccatgagtttgagatgcagattctgaaa
gagaggctgcagtgcacagcagacaaccaggagaccctgagaactcacctgcagcacatc
gccaaggtgttgctgccatggccagtgccggactcggagctggcgggggtgcgctgtctc
tcccgggtgaccgcgagggaggggaagtggccggagcacagagacgcctgggtggcactg
agcgggactcagctgctgctttacctcacaggagggtgccagagagacaggctgaggctg
actctctcacagaactacacctttatagcgacggagaagatgtttgaaatcatctcacca
gagaggacactgtcactgcagtttgagcacagccagccctgtgagaagtggggtgtcctg
ctgaaggatgcgcttcaacctccccagtccagctcctcccttggggggggctccctgtac
cccagcctgtgccgcggctccacaagagtgccagaccccatcgagaggtgcatcagctac
atcacgcagcacggtctaacagtggagggtatttaccggcgctgcggtcaagtggggaag
atctctcggctggtggaggggctctgcagcaccccctgcagggcgcagtttgagaagggg
gagctgggggtagtggatgtgtcaggagccctgaaacagtgtctcaagctacacactgca
ctctttccagagccacacctcagccactggctccagtctgcaggtatccctgggcaggca
gagaggctgctcgggtatcgtgaggtactggagcagctgtctgacgagcagagaggcatt
ctgagcaggctgtttggacacctctaccaggtgcaggcgtacagccaggtgaaccgcatg
acccctgagaacctggccctagtgttcgtgcccacgctgttcccagaccatgctctgagt
accgacgctgtgaagctgaccagagagctcatcacacactacacagcgctcttccacgga
ggtgaggaggagggttctgcggaggacttgttcacgattctctga
DBGET
integrated database retrieval system
