Polyodon spathula (Mississippi paddlefish): 121295630
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Entry
121295630 CDS
T07273
Symbol
htr2cl1
Name
(RefSeq) 5-hydroxytryptamine (serotonin) receptor 2C, G protein-coupled-like 1
KO
K04157
5-hydroxytryptamine receptor 2
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04020
Calcium signaling pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
pspa04540
Gap junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
121295630 (htr2cl1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121295630 (htr2cl1)
04082 Neuroactive ligand signaling
121295630 (htr2cl1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04540 Gap junction
121295630 (htr2cl1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04030 G protein-coupled receptors [BR:
pspa04030
]
121295630 (htr2cl1)
G protein-coupled receptors [BR:
pspa04030
]
Rhodopsin family
Biogenic amine
Serotonin
121295630 (htr2cl1)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
7tm_1
7TM_GPCR_Srsx
7TM_GPCR_Srx
7tm_4
7TM_GPCR_Srv
Motif
Other DBs
NCBI-GeneID:
121295630
NCBI-ProteinID:
XP_041076455
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Position
20:15232498..15492706
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AA seq
467 aa
AA seq
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MMSSHSGTGISISLTTVSLNVGLHGGLMAWHVNSSLSIADSLNLSDSKSISQSSMKEKNW
PALMILIIIILTIGGNILVIMAVSFEKKLQNATNFFLMSLAVADMLVGILVMPVSLINIL
YDYAWPLPSALCPIWIYLDVLCSTASIMHLCAISLDRYVAIRNPIEHSRFNSRTKARMKI
AAVWTISIGISMPIPVIGLHDESKVFVNGSCILNEENFVLIGSFVAFFIPLIIMVFTYCL
TVKVLQRQATVFLHEENPKQQRRSSLNCLKKDASQTPSDNISIIHSLVRPSHLNSPLSRE
QKTGGKGMMQAIRNERRASKVLGVVFFLFLLMWCPFFITNVMSVLCKGACDRELLGELLN
VFAWVGYISSGVNPLVYTLFNKTYRQAFSSYIRCQYKNSKTPLNGIQQPPSLTTTIYEKD
INLSYRNGNELNSMDQNNTDEALEMQPGTLEVSINSCNVIIDRISCV
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgatgagcagtcatagcggcacaggcatatcaatcagcttgaccacggtgagcctgaat
gtggggctgcatgggggcctgatggcttggcatgtgaacagctctttgtccatagcagac
tcgctgaacctctctgactccaagagcatctcgcagtcatctatgaaggagaagaactgg
ccagctttgatgattttgatcatcattattctcaccattggtggaaacatactggtgatt
atggctgtgtccttcgagaagaagctccagaacgctacaaacttcttcttaatgtccctg
gctgtcgccgacatgctggtggggattctggtcatgccggtgtccctcattaacatcctt
tacgactatgcctggcctctgcccagtgcattatgtcccatctggatctatctggatgtg
ctgtgctccactgcgtccatcatgcatctgtgcgccatctctctggatcgctatgtggcg
atacgcaaccccatcgagcacagccgcttcaactcacgcaccaaggctaggatgaagatc
gctgcggtctggaccatatccattggtatttcaatgcccattcctgtcataggcctccat
gacgaatccaaagtttttgttaatggaagctgcatcctaaacgaagagaactttgttctc
atcgggtcctttgtggcttttttcatccccctcatcatcatggtcttcacatactgcctg
acagttaaggttctgcagagacaggccactgtgtttttacacgaggaaaaccctaaacag
caaaggagaagcagcctgaactgtctaaagaaggatgccagccagactccctctgacaac
atatccataatacacagcctagtacggccttcccacttaaactctcccctcagtagagag
cagaagacgggtggcaaaggcatgatgcaggccattaggaacgagcgcagggcctccaag
gttctgggagtggtgttctttcttttcttgcttatgtggtgcccattcttcatcactaac
gtcatgtctgtcctctgcaaaggagcctgtgaccgagagctccttggagagctgctcaat
gtgtttgcctgggtgggctacatttcttctggagtcaaccccttggtttacaccctcttc
aataaaacctaccggcaggcgttttccagttatatccggtgccagtacaagaacagtaaa
acacccttgaatggcatacagcagccgcccagcctcactaccaccatctatgagaaagac
atcaacctcagctatagaaacgggaatgagctgaacagcatggatcagaacaacactgac
gaggcactggaaatgcaaccaggtaccttggaagtatctattaacagctgcaatgtcatc
attgacagaatcagctgtgtgtag
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