Polyodon spathula (Mississippi paddlefish): 121295642
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Entry
121295642 CDS
T07273
Name
(RefSeq) glutamate receptor 3-like isoform X1
KO
K05199
glutamate receptor 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121295642
04082 Neuroactive ligand signaling
121295642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121295642
Ion channels [BR:
pspa04040
]
Ligand-gated channels
Glutamate (ionotropic)
121295642
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
DUF2061
Motif
Other DBs
NCBI-GeneID:
121295642
NCBI-ProteinID:
XP_041076487
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Position
20:complement(3008038..3086996)
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AA seq
886 aa
AA seq
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MGRNIVQTVFFLLWLVGTSFGGFPNTISIGGLFMRSTAQEHSAFRFAVQLYNTNQNVTEK
PFNLNYHVDHLESSNSFSVTHAFCSQFSRGVYAIFGFYDKKSMNTLTSFCGALHTSFITP
SYPTDADVQFVIQMRPALKGAILSLLAHYKWEKFVYLYDTERGFSILQAIMESAVANNWQ
VTARSVGSISDPQEFRRIIEEMDRRQEKHYLIDCEVERINAILEQVVVLGKHSRGYHYVL
ANLGFSNVSMERVLQGGSNITGFQIVNPENPIVQQFMQRWVRLDEREFPEAKNTPLKYTS
ALTHDAILVIAEAFRYLRRQRVDVSRRGSTGDCLANPAVPWSQGIDIERALKMVQVQGMT
GNIQFDTFGRRSNYTIDVYEMKAGSSRKVGYWNEYERFVYITDQQVSNDSSSVENRTIIV
TTIMEAPYVMLKKNYEQLEGNERYEGYCVDLASEIAKHVGIKYKLSVVADGKYGARDSET
KIWNGMVGELVYGRADIAVAPLTITLVREEMIDFSKPFMSLGISIMIKKPQKSKPGVFSF
LDPLAYEIWMCIVFAYIGVSVVLFLVSRFSPYEWHLDDNDEARDPQTPPDPPNDFGIFNS
LWFSLGAFMQQGCDISPRSLSGRIVGGVWWFFTLIIISSYTANLAAFLTVERMVSPIESA
EDLAKQTDIAYGTLDSGSTKEFFRRSKIAVYEKMWSYMKSAEPTVFAKTTPDGVARVRKS
KGKFAFLLESTMNEYIEQRKPCDTLKVGGNLDSKGYGVATPKGSALRNAVNLAVLKLNEQ
GLLDKLKNKWWYDKGECGSGGGDSKDKTSALSLSNVAGVFYILVGGLGLAMMVALIEFCY
KSRAESKSLKLAKNTQNFKPVPPTNTQNFATYREGYNVYGTESVKI
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atgggacgtaacattgtacagacagtcttttttctgttgtggcttgtcggtacatcgttt
ggtggctttccgaacacgatcagtataggaggacttttcatgagatctacagcgcaggag
cacagcgctttcaggtttgccgtacaactgtacaacacaaatcaaaacgtgaccgaaaaa
ccctttaatctgaattatcatgtagatcacctcgaatcatccaacagtttttctgtgact
catgctttctgctcacagttctccagaggagtttacgccatctttggcttttacgacaag
aagtcaatgaacacgctcacctcgttctgtggggccctccatacttccttcatcacgccc
agttacccaacggacgccgatgttcagtttgtcatccagatgaggccagcgttgaaaggg
gccatcttgagtctccttgcccactacaaatgggagaagtttgtgtacctttacgacaca
gaaagaggattctccattctacaagcaatcatggagtcagctgtggcaaacaactggcag
gtgaccgcacggtcagtggggagtataagcgatccacaggagttcagacgcatcattgaa
gaaatggacaggcggcaagagaagcattacttaatagactgtgaggtcgagaggataaat
gccattctggaacaggttgtagtccttggaaaacacagccgaggttaccattatgttctg
gctaacctgggcttctcgaatgttagcatggagagggttctgcaaggcggatcaaatata
acagggtttcagattgtcaaccctgaaaacccaattgtacagcagttcatgcaacgctgg
gtccgcctggatgaaagagaattccccgaagcgaaaaacactccgctgaagtacacgtcg
gctctgacccacgatgccatactcgtgattgctgaagcctttcggtacctgagacggcag
cgagtggacgtgtcacgaaggggcagcaccggagactgcttagccaaccctgctgtaccc
tggagccaaggcattgacattgagagagctctgaaaatggtacaggttcaaggcatgaca
ggaaacatccagtttgacacctttggtcggagatcaaactacaccatcgatgtgtacgaa
atgaaagccggcagttcccgaaaggtgggctactggaatgaatacgagagatttgtgtac
atcacggatcaacaggtctccaacgactcctcatctgtggaaaaccgaacgatcatagtc
acaaccatcatggaagctccgtacgtgatgctaaagaaaaactacgagcagctggaaggg
aatgagagatacgaaggctactgtgtcgatttagcttctgaaattgcgaagcacgttgga
ataaaatacaaactgtcggttgtggcagatggaaaatatggtgcgagggactcagaaact
aagatatggaacggtatggtgggtgaactcgtatatgggagagcagatatagctgttgca
ccgcttactataacactggtacgagaagaaatgattgacttttctaaaccctttatgagc
ttggggatctccattatgataaagaagcctcaaaagtccaaacctggagtgttctccttc
ctggacccattggcctatgaaatttggatgtgtatagtgtttgcctatatcggagtcagt
gtggtgctcttcctggtcagccgattcagcccttatgaatggcatttggatgacaatgat
gaagctcgtgacccccagaccccaccggacccgccaaacgactttgggattttcaatagt
ctctggttttctctgggagcctttatgcagcaaggatgcgatatttcaccaagatccctg
tcaggacgaattgttggaggcgtgtggtggttcttcaccctcatcatcatttcatcctac
accgccaatcttgctgctttcctcactgtggagaggatggtgtcccccattgaaagtgca
gaagatctggccaaacaaactgatatcgcttacgggaccctggactcgggctccaccaaa
gaattcttcagacggtcgaaaatagctgtttacgaaaaaatgtggtcttacatgaaatct
gcagagcccactgtgtttgccaagacaacaccggacggggttgcccgggtacgaaagtcg
aagggaaagttcgcctttcttctcgaatccaccatgaacgagtatattgagcagcggaag
ccctgtgacacgttgaaagtgggcgggaacctcgactctaagggctatggtgtggcgacc
cccaaaggctcagcattaagaaatgctgttaacctggcagtattaaaactgaatgagcaa
ggcctcttggacaaattgaaaaacaaatggtggtacgacaaaggagagtgcggcagcggg
ggaggtgactccaaggacaagacaagcgcactgagtttgagcaatgtggctggagtcttc
tatattcttgttggagggctcgggctggccatgatggtagctttgatagagttctgttac
aagtcccgagcagagtccaaaagcctgaaacttgcaaagaacactcaaaactttaaacct
gttcccccaacaaacacccagaacttcgccacctaccgagaagggtacaacgtgtatgga
acagagagtgttaaaatctag
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