Polyodon spathula (Mississippi paddlefish): 121295680
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Entry
121295680 CDS
T07273
Name
(RefSeq) homeobox protein CDX-1-like
KO
K09312
homeobox protein CDX1/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121295680
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain ANTP: HOXL
121295680
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Gene cluster
GFIT
Motif
Pfam:
Caudal_act
Homeodomain
Homeobox_KN
DUF7255
YdaS_toxin
MS_C
Motif
Other DBs
NCBI-GeneID:
121295680
NCBI-ProteinID:
XP_041076573
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All DBs
Position
20:4510500..4515096
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AA seq
279 aa
AA seq
DB search
MYVGYLLDKEAGMYHQGPVRRPGINLPAQNFVSTPQYSEYTGYHHVPNMDSHAQSPGSWG
CPYATEREDWNAYGLGPSNAVPTPMSSSSPGQVSYCSPDYNSMHPAASGVLPPPQENVTV
GPQSPDSERRHSYDWMKKTVQSSSTGKTRTKEKYRVVYTDHQRLELEKEFHYNRYITIRR
KSELAANLGLSERQVKIWFQNRRAKERKIIKKKMGLSDGSGGSVHSDPGSVSPLPLPGSL
SPGINAHVFPPPGMNTLPPIGNLQQVTVTQINSTWTLDK
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgtacgtgggataccttctggataaagaagccggcatgtaccaccaaggacctgtaaga
cgccccggcatcaatctgccagcacagaactttgtatcaactccacagtactctgagtat
acaggatatcatcatgtgcccaatatggacagtcacgcacaatctccggggtcttggggc
tgtccatatgcgacagagagggaagactggaatgcctatggtctaggaccttcaaacgcg
gtacctacccccatgagtagctcatcgcccggacaagtgtcttactgctcccctgattat
aactcaatgcacccggcagcatccggagtcttaccgccaccccaggaaaatgttacagtg
ggaccacagtcccctgacagtgagcggcgtcattcgtatgactggatgaagaaaactgta
cagtcatcttcaaccggtaaaaccagaacgaaagagaaatacagggttgtgtatacggat
caccagcggctcgaactcgagaaagaattccattacaacagatacatcacaatcagaaga
aaatccgaactggcggcgaacctcgggctttccgagagacaggtgaaaatctggtttcaa
aatcgccgagccaaagagaggaagattattaaaaagaagatgggtctttctgacggcagc
gggggctcagtgcacagtgacccggggtccgtgagccctctcccgctaccaggctctctc
agtcctgggatcaacgcccatgtatttcctccacctggaatgaacactttaccgccaatt
gggaatttacaacaagttacagttacccaaataaacagcacctggactttggataagtaa
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