Polyodon spathula (Mississippi paddlefish): 121295693
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Entry
121295693 CDS
T07273
Name
(RefSeq) high mobility group protein B3-like
KO
K11296
high mobility group protein B3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121295693
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121295693
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
121295693
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
121295693
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
HMG_WDHD1
Ribosomal_60s
Nucleo_P87
MetallophosC
Motif
Other DBs
NCBI-GeneID:
121295693
NCBI-ProteinID:
XP_041076594
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All DBs
Position
20:13049015..13053815
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AA seq
208 aa
AA seq
DB search
MAKGDPKKPKGKMSAYAYFVQTCREEHKKKSPDVPVNFSEFSKKCSVRWKTMSGTEKSKF
EDLAKQDKTRYDNEMRDYQPGGKGGKRKKDPNAPKRPPSGFFLFCSEQRPKIKVTNPGLT
IGDVAKKLGEMWNNLTEATKRPYVIKAGKLKEKYEKDVAEYKSKGKVDSAKPAAKAAPKK
RVEEEEDEDDEEEDEEEDEEEDDDEDDE
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagggagaccccaagaagcccaaaggcaagatgtctgcctatgcttactttgtg
caaacttgccgcgaggagcacaagaagaaaagccctgatgttcctgtaaacttttcagag
ttctccaagaagtgttctgtgagatggaagaccatgtctggcactgagaagtctaagttt
gaggacctggcaaaacaagataagacacggtacgataatgagatgagagactatcagcca
ggaggaaagggtggcaagagaaagaaggaccccaacgcacccaagagaccaccatctggt
ttcttcctcttttgctcagagcaacgtcctaaaatcaaagttaccaacccaggcctcact
attggtgatgtggccaagaagcttggtgagatgtggaacaacctgactgaagccacaaaa
aggccctatgtgataaaggcaggcaagctaaaggaaaaatatgagaaggacgttgcagag
tacaagtccaaaggaaaggttgactctgcaaagccggctgcaaaggcagcccccaagaag
agagtagaggaggaggaggatgaggatgatgaggaggaggatgaagaggaagatgaagag
gaggatgatgatgaagatgacgaataa
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