KEGG   Polyodon spathula (Mississippi paddlefish): 121295714
Entry
121295714         CDS       T07273                                 
Name
(RefSeq) chondroadherin-like
  KO
K06248  chondroadherin
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04510  Focal adhesion
pspa04512  ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    121295714
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    121295714
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   00535 Proteoglycans [BR:pspa00535]
    121295714
Proteoglycans [BR:pspa00535]
 Extracellular matrix (ECM) proteoglycans
  Small leucine-rich proteoglycan (SLRP) family
   class IV
    121295714
SSDB
Motif
Pfam: LRR_8 LRR_4 LRR_5 LRR_1 LRR_14 LRRNT LRR_9 LRR_EndoS LRRCT
Other DBs
NCBI-GeneID: 121295714
NCBI-ProteinID: XP_041076635
LinkDB
Position
20:complement(18552333..18577294)
AA seq 361 aa
MQRMSFLVASLLALVASVSPALSQCPSPCHCHSDLQHVICDNVGLKKIPVASDATRLLNL
QRNQLPVIPSGAFSSSPGLISLHLQSCHIKEISGKAFKGLKKLIYLYISNNEISIIKPGA
FEDLSELTYLYLDSNRISDLPRGILAPMINLFTLQLNNNKIRELRAGSFSGAKDLRWLHI
SDNDMASIQPSALEDVENLAILHLEHNRLSSFPSAALSKLRVLEELKLSKNSMKSIPDNA
FQSFGRYMEKLFLDNMGLERFSDGAFNGVTALKSLHLENNKLNTLPSSLSFTTIENMTIA
NNPWMCSCSLAPLRKWMDSNRLRTEGACAAPSQYRGQQIRDTAAFNSCRQKTKRAKKGAR
Y
NT seq 1086 nt   +upstreamnt  +downstreamnt
atgcagagaatgagcttcctggttgcctctttgctagccctggtggccagcgtctctcct
gctctgagtcagtgccccagtccctgccactgccacagtgacctgcagcatgtcatctgt
gacaacgtggggctcaagaagatcccagtagcgtctgacgccacacgcctcctcaacctg
cagaggaaccagctgcctgtgatccccagcggtgccttcagcagctcgccagggctcatc
tccctgcacctgcagagctgccacatcaaggagatctcgggcaaggcctttaaagggctc
aagaagctcatctatctttacatatccaacaacgagatcagcatcatcaagccgggcgcc
ttcgaggacctgagcgagctcacctacctctacctggacagcaaccgcatcagtgacctg
ccccgcggcatcctggcccccatgatcaacctcttcaccctgcagctgaacaacaataag
atccgtgagctccgggccggctccttcagcggcgccaaggacctgcgttggctccacatt
agcgacaatgacatggcttccatccagccctctgccctggaggatgtggagaacctggcc
atcctgcatctggagcacaaccgtctgtcttccttccccagtgccgccctgagcaagctg
cgtgtgttggaggaactcaagctgtccaagaactccatgaagagcatccctgacaatgcc
ttccagtccttcgggagatacatggagaagctcttcctggacaacatgggtctggagagg
ttttcagacggagcatttaacggagtcacagccctcaagtccctgcatttggagaacaac
aagctcaatacccttcccagcagcctctccttcaccaccattgagaacatgacaatcgcc
aacaacccctggatgtgcagctgctcgctcgccccactgcgcaagtggatggactccaac
cggctccgcacagagggcgcctgtgccgctccctctcagtaccgaggccagcagatcagg
gacaccgccgccttcaacagctgcagacagaagacaaagagggctaaaaaaggggcgcgc
tattaa

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