Polyodon spathula (Mississippi paddlefish): 121295800
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Entry
121295800 CDS
T07273
Name
(RefSeq) gamma-aminobutyric acid receptor subunit alpha-3-like
KO
K05175
gamma-aminobutyric acid receptor subunit alpha
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04080
Neuroactive ligand-receptor interaction
pspa04082
Neuroactive ligand signaling
pspa04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
121295800
04082 Neuroactive ligand signaling
121295800
04519 Cadherin signaling
121295800
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pspa04040
]
121295800
Ion channels [BR:
pspa04040
]
Ligand-gated channels
GABA-A
121295800
SSDB
Ortholog
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Motif
Pfam:
Neur_chan_LBD
Neur_chan_memb
CytochromB561_N
Motif
Other DBs
NCBI-GeneID:
121295800
NCBI-ProteinID:
XP_041076790
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Position
20:complement(14267055..14420014)
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AA seq
470 aa
AA seq
DB search
MALGFLSCSSSIPDLWILLLVIVVLSQPGYMRHDVLLPDDGKDNITIFTRILDRLLDGYD
NRLRPGLGESVTEVETDIYVTSFGPVSDTDMEYTIDVFFRQRWRDERLKFDGPMKILPLN
NLLASKIWTPDTFFHNGKKSVAHNMTTPNKLLRLVDNGTLLYTMRLTIHAECPMHLEDFP
MDSHACPLKFGSYAYTNSEVVYIWTLGHDKSVVVAEDGSRLNQYDLLGHAVSTEVIRSST
GEYIVMTTYFHLKRKIGYFVIQTYLPCIMTVILSQVSFWLNRESVPARTVFGVTTVLTMT
TLSISARNSLPKVAYATAMDWFIAVCYAFVFSALIEFATVNYFTKRSWAWDGKKAMEAQE
QRKKDSAPLSKKANNTYNIVGTTYAINIAKDPGLPTISKSAATAATTAAPVKIPQMEESP
PESNKAYNSVSKVDKMSRIIFPVLFAIFNLVYWASYVNREPIIKGLSPSK
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggcgctggggttcctgagctgctcttcatccattcctgacctgtggattctgctcttg
gtcattgtagttctttctcagccaggatatatgagacatgatgttctcctcccagatgac
ggtaaagataatatcacaatctttacccgaatcctcgacagactgttggatggctatgac
aacaggctgaggcctggcctgggagaaagtgtaactgaagtggaaacagatatctatgtt
acgagttttggaccagtttcagacactgacatggaatatacaatcgacgtgttcttccgg
cagagatggagagatgaacgtctgaagtttgacggcccaatgaagatcctccccctcaat
aacctgctggcgagtaagatctggaccccagacacattcttccataacgggaagaaatct
gtagcccacaatatgaccacacccaataaactgctccgcctggtggataacggaacgctg
ctctacaccatgaggttaacaattcacgcagagtgtcccatgcacctcgaggacttccca
atggattcacatgcttgtccattaaagtttggaagttatgcatacacaaactctgaagtg
gtttatatttggaccctcggccacgataaatctgtggtggtagcagaggatggttctcgc
ttaaaccagtacgatttgctgggccatgctgtcagcactgaagtgatcagatccagcaca
ggagagtacatagtgatgactacgtatttccatttgaaaaggaaaattggctattttgtg
attcagacatacctcccatgcatcatgactgtcattctgtcccaggtatccttctggctc
aacagagagtcagtacctgctcgcacggtgttcggcgtcactaccgtcctcacaatgacc
accctgagtatcagtgctagaaactctttacccaaagtggcgtacgcgacggccatggac
tggttcatagccgtctgttatgcctttgtgttttctgcactgattgaatttgcaacggtg
aactatttcaccaagcggagctgggcgtgggacggtaaaaaagctatggaggcccaggag
cagaggaagaaggattcagcaccactttcaaagaaagccaataacacatacaatattgtt
gggacaacctacgccatcaacatagctaaagatccaggcctacctacgatttcaaagagc
gcagccacagcagctaccacagcagctcctgtcaaaatccctcaaatggaagaaagtccc
ccggaaagcaacaaagcctacaacagtgtcagcaaagtggacaagatgtcccgcattata
ttccctgtgctttttgccatttttaatttggtttactgggcatcctatgtcaacagagag
ccaatcattaaagggttaagccctagtaaatga
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