Polyodon spathula (Mississippi paddlefish): 121295816
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Entry
121295816 CDS
T07273
Symbol
rhbdl3
Name
(RefSeq) rhomboid-related protein 3 isoform X1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
pspa01002
]
121295816 (rhbdl3)
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
121295816 (rhbdl3)
Peptidases and inhibitors [BR:
pspa01002
]
Serine peptidases
Family S54: Rhomboid family
121295816 (rhbdl3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
EF-hand_6
AIF-1
EF-hand_8
EF-hand_11
EH
DUF5580_M
EF_EFCAB10_C
Motif
Other DBs
NCBI-GeneID:
121295816
NCBI-ProteinID:
XP_041076823
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All DBs
Position
20:30013739..30044819
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AA seq
411 aa
AA seq
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MDPGTRARPREAHASPSPAVAANAEGDAIEVLESTDVLPMAPEDHWKTLFDQFDPESSGY
ISTEQFRSLLNTYGSELDPHKLAVLLALADSNADGMICYQDFVNLMSNKRSNSFRRAILQ
GNRQRKSAALLEEPGLGLSQRLVRHVAYETLPREVDRKWYYDSYTGCPPPWFIIAVAIVE
VAVFVYYGLLLDRWVLQVSHPLYLRNPLVYHPQLRAQAWRYLSYIFMHAGIEHLSLNVLL
QLLVGVPLEMVHGALRIGFLYISGVLAGSLAVSVADMTAPVVGSSGGVYALVSAHLANIV
MNWSGMKCQFKLLRMGIALLCMSVEFGRAVWLRFYPSVYPPCPNPSFVAHLGGVAVGVTL
GVVVLRNYEQRLQEQSLWWIFVLVYIIFILFAIFWNIFAYSLLELRLPPLP
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atggacccaggaacgagagcccgaccgagggaagcccacgccagcccctcccccgcggtt
gcagccaatgccgagggagacgctattgaagtgctggaaagcacagatgtactgcctatg
gctcccgaagatcattggaaaactcttttcgatcagtttgaccctgagagctcgggctac
atcagcacggagcagttccggagccttctgaacacgtacggctcagagctggacccccac
aagcttgcggttctcctagccctggctgacagcaacgcggacgggatgatctgctaccag
gacttcgtcaatctgatgagtaacaagcgctcaaacagtttccggagagcgatcctgcag
ggcaaccgacagaggaagagcgccgccctgctggaggaacctggcctgggcctctcccag
cgcctcgtccgccacgtcgcctacgagaccctcccccgagaggtggaccgcaagtggtac
tacgacagctacaccggctgccccccaccctggttcataatcgccgtggcaatcgtggag
gtggctgtgtttgtttattatgggctgctgctggacaggtgggtcctccaggtgtctcac
ccgctctatctgaggaaccctctggtgtaccacccccagctccgagcgcaggcctggcgc
tacctcagctacatcttcatgcacgcagggatagaacacctcagcctgaacgtgctgctg
cagctgctggtgggcgttcccttggagatggtgcacggggccctgcggatcggcttcctt
tacatctccggagtgctggcaggttccctggccgtgtcggtggctgacatgacggcgccg
gtggtggggtcatcgggaggggtctacgctcttgtctctgcccaccttgccaacatcgtc
atgaactggtcgggaatgaagtgccaattcaaactgcttcgcatggggattgcattgctt
tgcatgagcgtggagttcgggagagcggtgtggctgcgtttctacccctcggtctacccg
ccctgccccaaccccagcttcgtggcccacctgggcggggtggcggtgggggtcacgctg
ggggtggtggtcctcaggaactacgagcagaggctccaggagcagtcgctctggtggatc
ttcgtcttagtctacatcatcttcattctgttcgccatcttctggaacatcttcgcctac
agcctgctggagctccgtctgcctccccttccctga
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