Polyodon spathula (Mississippi paddlefish): 121295829
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Entry
121295829 CDS
T07273
Name
(RefSeq) neurite extension and migration factor-like isoform X1
KO
K25862
neurite extension and migration factor
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99995 Signaling proteins
121295829
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4683
Motif
Other DBs
NCBI-GeneID:
121295829
NCBI-ProteinID:
XP_041076848
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Position
20:11809478..11913223
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AA seq
1418 aa
AA seq
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MDVLQDNSSSAQERSPAQINGENEDGSYDQRDDVKPCAAAYAAVTFSSSAPATTDSTQKE
NEECQRVVPPLTSKEPCILSPPSPLRLTEVPDHTSDDSSTHATSLISCVTKGVSPWSLPE
DCDRTPFTIMEPGGISALTGDCLMPQSRTCLGCFIESKDSVDAEPGISLKMGDINRDYDT
CSISDIGIHCMSTGESARYGDQLLSDQLLSFPLHKSRTADKRDVEKSDSDSEDPTPKNDY
EGLLLDKCNGDEALLSNPNQDWGYFESFISESKIELLDLCSKNELSVNLFSEEDVDNYMF
DDDDSTLSSDVCSLKIRYESFQDNLREKTNTLQEETQFNFFPSVLVNCTKKENGPVKKNA
DSQFKAGEISLWDSEDKADTNKSCNPGGTVPYLPAKRNHFFDSNNSAEDSGEYSDDDSSC
TGSSYDTFREAKECSRFLSRENSSSSSQLNYGLRAKRKVRYSDDYLYDVDSIESEKNAEK
KELQPYGPKEEDDDDWCPKKRRKSSRKEAPVIIKYIIINRFKGEKHMLVKLGKVDPTNTT
VSLNDDLLNKYEKMAPLKDYWEKQQSNRNGLAIGDKQHFHRNGSDPSFRPSPPKRKYKIA
NRHRIQRIQTVEQMPNKQGSSSDHKQESHTTDDAALLGMPLTIATPSCANRLDSNDITHT
GSEKSRSQESEDKGIETKIVRIKKFKSEARLRSKRMKAMQEDSKSITNLTAICPALENQD
SVGMNDVTIHCAASSPHLSESYSTDADAEKSTFLPATTCSSDKPVPSADIATSVPVVPGG
YLQTLLDASDSSNNTGISYFSQHPSEQHPVSVSHTEKQFTSLQLAQSCVLSPPSESELQQ
SPHHLEIEQNFPPMWHSEPSNSQPSFTSNIPETALLSSNFGVSAQMTDDMSGYGQLNLNS
NRLPYQKNYLHVHPLQADTDYQACQVQCGEGHFQFQQDTLSTDDGRLASFDSVGSLSATS
SNYSSLSLKSCEKDGEDDMNDNFLAHCSPKLVIQQSIDEIIPLKESTDLLDISNFTPDKF
RHSSLSEMSPPDTPNLSPQVTGPEMKSMGKAKDFQDSTEAILGSSQDVNWNCNVLQQQEH
HNSPFMVNGHRFQFHMFNDDDTVGLVEKSPCLETFDKQLHEISTSSAKTSKAKKKSTPKQ
AGTDQKSAKKARSPKGSKTSEKSKTPRQGSRSKKGKNGTEEKNVKAQAGDCKTALKDPIT
IHNPGNFVLSNDWSLGKDANMSWSDPSIAQNANLLDDDQREFEEPSNILSNIASGMAEVQ
RFMMASIEPLWSPAASVCQPPEANSLKLKTLKILASTPAESKRKGSSSSVSPGVIKSRKS
STKSTCSKTQVKLNISSPPLPSIALDCNGGMSPRCVFDKSITNLSTSGNNGPPHKKMYRH
KTSAKFPRDENSKGKRTEREQNKDLSVMASLEKLSFLN
NT seq
4257 nt
NT seq
+upstream
nt +downstream
nt
atggatgttctacaagataacagctcctctgcacaggaacgaagccctgctcagattaat
ggggagaatgaagatggatcatatgaccagagggatgatgtgaagccatgtgctgctgca
tatgctgcagttacattttcatcctcggctccagcaacgactgacagcacacagaaagaa
aacgaagagtgtcagcgggttgtgcctccgttgacttcaaaggagccctgtatcctgagc
cctccgtctcctctgaggctcacagaggtacctgatcacacttcagatgactcttccaca
catgccacctccctcatatcctgcgttaccaagggggtgagcccctggtccctgccagag
gattgcgaccgaaccccgttcaccatcatggagccaggtggtatatcggctctgactggc
gactgcttgatgccgcagagccgcacctgcctgggttgctttatagaatctaaagacagt
gtcgacgctgagccaggaatcagcctgaaaatgggggatataaacagggattatgatacc
tgctccatctcagatatagggattcattgcatgagcacaggagagagtgcaagatatggg
gatcaactgctttctgatcagctcctaagcttcccactgcataaatcaaggactgcagac
aaaagagacgtggagaaatctgacagtgattcagaagacccgactccaaaaaatgattac
gagggattactgttagacaaatgcaacggggatgaggctctgctatcaaatcccaatcag
gattggggctattttgagtcctttattagtgaaagtaaaatcgaactgcttgacctatgc
tccaaaaatgagctctctgtaaaccttttttccgaggaggatgtggacaattacatgttc
gatgatgacgactccaccctcagcagtgacgtgtgctctttaaagatccgctacgaatcc
ttccaggataacttgagggaaaagaccaacaccctgcaagaggagactcagtttaacttc
ttccccagtgtccttgtcaactgcacgaaaaaggaaaacggcccagtcaagaagaacgca
gactctcagtttaaagctggcgagataagcctttgggatagcgaagacaaagctgataca
aacaaaagctgtaaccctggtggtacagtgccgtacttacccgctaaaagaaaccatttc
tttgactccaacaattctgctgaagattcaggggaatacagcgacgacgacagttcgtgc
acgggatcttcttacgacactttcagggaagctaaggagtgcagtaggtttttatccaga
gagaactccagttcatccagccagctaaactacggattaagagccaaacgaaaagtgaga
tacagtgacgactacctgtatgatgtggattctattgagagcgaaaagaatgcagagaaa
aaagagctgcagccatacggccctaaagaggaagatgatgacgactggtgcccaaagaag
aggcgaaaatcctctcggaaagaagccccagttatcattaagtatataatcatcaaccgc
ttcaaaggagagaagcacatgctggtaaaactaggcaaagttgatcccactaacacaaca
gttagcttaaacgatgacctactgaacaaatatgaaaaaatggctcccttaaaagactat
tgggaaaaacagcagagcaacaggaacggtctggctattggagataaacagcattttcat
aggaatggttcagatccgtcgtttaggcctagccctccgaaaagaaaatataagattgca
aacagacataggattcaaagaattcaaactgtggagcaaatgccaaacaagcagggctct
tcttctgatcacaagcaggaaagccacactacagatgatgcagcccttctgggcatgcca
ttaacaatagcaacccccagctgtgcaaacagattagactcgaatgacataacacacact
ggctcagaaaagagcagatcacaagaaagcgaagataagggaattgaaacaaaaattgtc
agaataaaaaaattcaaaagtgaagccagattgaggagcaaaagaatgaaagccatgcaa
gaggatagcaaaagcataacaaacctaacagcgatttgccctgctttagaaaaccaggac
tctgtaggcatgaatgatgttactattcactgtgctgctagcagtcctcatttatctgaa
agctacagtactgatgctgatgctgaaaaatctacttttttaccagccaccacctgctca
tctgacaagcctgtaccatctgctgacattgctacaagtgtaccagttgtccctggaggc
tatctgcagacgttgctggatgcatctgattcatcaaataatacagggatctcttacttc
tcccaacatccctctgagcagcatcctgtcagtgtttcccacacggaaaagcagttcact
tctctgcaactcgcacagagttgtgtgctctccccaccctccgagtcagagcttcagcag
tcgccccaccaccttgagattgagcagaactttcctcccatgtggcacagcgagcccagc
aacagccagccttcatttacatccaatatcccagaaactgctctgctatcaagcaatttc
ggggtgtctgctcaaatgacagatgacatgtctggatatggccagctaaacctgaacagc
aacagactgccgtatcagaagaattacttgcatgtgcaccccttgcaggctgacactgat
tatcaggcatgccaggtacagtgtggagagggacattttcagtttcagcaagacacacta
agtacagatgatggcagactcgccagttttgattcagtgggttcattgtcagctacttct
agcaattatagctctttaagtttaaagtcctgcgagaaggatggtgaagatgacatgaat
gataacttcttagcccactgcagtcccaaattggtgatccagcaaagcattgatgagatt
atccccctgaaggagtcaacagacttgctggacatttcaaacttcactcctgataagttc
agacattcatccctgtcggagatgtcacctcctgacacgccaaatttgtctcctcaagtt
acagggccagaaatgaagtccatggggaaggctaaagacttccaggattccactgaagcc
attctgggcagctctcaggatgtgaactggaactgtaatgtccttcaacagcaggaacat
cacaatagcccattcatggttaacggtcatagatttcagttccacatgttcaatgatgat
gatacggttggtctggttgagaaatccccctgcctggaaacctttgacaagcaactacat
gaaatcagcaccagcagtgcaaaaacttcaaaagcaaaaaagaaatcaacccccaagcag
gctgggactgatcagaagagcgcaaagaaagccagaagcccaaaaggcagcaaaacatca
gagaaaagtaaaactcctcgacaagggtccagatcaaagaaagggaaaaatggcacagag
gaaaagaatgttaaggcccaggctggggattgcaagacggcactgaaagatcccatcaca
attcacaaccctggcaactttgtgctttctaatgactggtcattaggtaaagacgccaac
atgagctggtctgatcctagcatagcacagaatgcgaatctccttgacgatgatcagcga
gagtttgaagagccctcaaacatcctgtccaacatcgcttctggaatggctgaggtccag
cggttcatgatggcctctatcgagccattgtggagccctgcagcgagtgtgtgccaaccc
ccggaagccaacagcctcaaattgaaaaccctcaaaatccttgccagcaccccagcagag
tccaaaaggaaagggagcagcagcagcgtttcccctggggtgataaagagccggaagtca
tccaccaagagcacatgcagcaaaacccaagtgaaattaaatatttccagccccccactg
cccagcattgcactggattgtaacggaggtatgtcgccaaggtgtgtctttgataaaagc
attactaatctaagtacttcaggcaataatggcccgccgcataaaaagatgtatcgtcat
aaaacaagcgcaaaatttccaagggatgaaaacagtaagggaaaacgaacagaacgcgag
cagaataaagacttatcagtgatggcctctttagaaaaactgagcttcttaaactga
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