Polyodon spathula (Mississippi paddlefish): 121295844
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Entry
121295844 CDS
T07273
Name
(RefSeq) syntaxin-1A-like
KO
K08486
syntaxin 1B/2/3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
121295844
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121295844
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pspa04147
]
121295844
Membrane trafficking [BR:
pspa04131
]
SNARE
Syntaxin (Qa)
Stx-PM
121295844
Exosome [BR:
pspa04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
121295844
Exosomal proteins of other body fluids (saliva and urine)
121295844
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Syntaxin
SNARE
ABC_sub_bind
Motif
Other DBs
NCBI-GeneID:
121295844
NCBI-ProteinID:
XP_041076873
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All DBs
Position
20:6628435..6630460
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AA seq
294 aa
AA seq
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MKDRLEELKNLREDDEGFPDDDFPGYDNPSFHEEEAKEMEEFFRTVSNLAAELDGLEDIS
EDIAKKQAQVLCSTAMETISAEKKLLGDLKNEFTVQAKGIQANLGQMKEASPFQGMCAEG
RIRQCQFNVLAQRHKEIMVCHFTKEMEYVGRLKEQIKRQTELAGLELAEEDLQMLVESPS
APQIVGSDIHVLAAQKHLALAHERHQQLLVLEAQISELHELFFHLEVLVSEQQGMVDNIE
HNVIQAIDYISQSNEQVKKALKYQRQSRIGAVFSAVLGMCACCACLSCVSKVVP
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcggctggaggagctgaagaacctgagggaggatgatgaaggctttccagat
gacgacttcccgggctacgataacccctctttccatgaagaagaggcgaaggaaatggag
gaattcttcaggacggtctcgaatcttgcagcagaactggatgggcttgaagatatttcg
gaggacattgccaagaagcaggcgcaggtcctgtgcagcactgcaatggagaccatcagt
gctgagaagaagctgctgggggacttaaagaatgagttcactgtccaggccaaggggatc
caagccaatctgggccaaatgaaggaggcttcccccttccaagggatgtgtgccgaggga
cggatccgacagtgtcagttcaacgtcctggcacagcgccacaaggagatcatggtctgc
cattttaccaaggagatggaatacgttggccggctgaaggagcagattaagaggcagact
gagctggccgggctggagctggctgaggaggatctccagatgctggtggagagcccttca
gcacctcagatcgtgggctctgacatccacgtcctggcagcccagaaacacttggccctg
gcccatgaacgccaccagcagctgttggtcctggaagcccaaatctcagagctccacgag
ctcttcttccacctggaagtactagtgtcagagcaacagggcatggtggacaacatcgag
cacaacgtcattcaggccatagactacatcagccagtccaacgagcaggtgaagaaggca
ctcaagtaccagagacagtcccgcatcggtgcagtcttctcggccgtgctggggatgtgt
gcctgctgtgcttgtctctcttgtgtgtccaaggtggtgccttga
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