Polyodon spathula (Mississippi paddlefish): 121295932
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Entry
121295932 CDS
T07273
Name
(RefSeq) receptor-type tyrosine-protein phosphatase delta isoform X1
KO
K06777
receptor-type tyrosine-protein phosphatase delta [EC:
3.1.3.48
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04514
Cell adhesion molecules
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121295932
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pspa01009
]
121295932
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121295932
Enzymes [BR:
pspa01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.3 Phosphoric-monoester hydrolases
3.1.3.48 protein-tyrosine-phosphatase
121295932
Protein phosphatases and associated proteins [BR:
pspa01009
]
Protein tyrosine phosphatases (PTPs)
Class I PTPs (Classical)
Receptor PTPs
121295932
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
Type II RPTP family
121295932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Y_phosphatase
fn3
I-set
Ig_3
Ig_DSCAM-DSCAML_C
Pur_ac_phosph_N
Ig_2
ig
fn3_2
PTP-SAK
Tc-R-P
V-set
Interfer-bind
DSPc
NDNF
Y_phosphatase3
PTPlike_phytase
PTP-NADK
Glyco_hydro_46
Motif
Other DBs
NCBI-GeneID:
121295932
NCBI-ProteinID:
XP_041076995
LinkDB
All DBs
Position
2:36737527..36964447
Genome browser
AA seq
1953 aa
AA seq
DB search
MLVPSCRMMHIARPVVVLLCFLLLADAEIPPKFTRTPDDQTGVSGGVASFICQATGDPRP
KIVWNKKGKKVSNQRFEVIEFDDGSGSVLRIQPLRTPRDEAIYECVASNSVGETSSSTRL
TVLREDQLPSGFPTIDMGPQLKVVERTRTATMLCAASGNPDPEITWFKDFLPVDTTNNNG
RIKQLRSESFGGTPIRGALQIEQSEESDQGKYECVATNGAGTRYSAPANLYVRELREVRR
VPPRFSIPPTNHEIMPGGSVNITCVAVGSPMPYVKWMLGAEDLTPEDDMPIGRNVLELTD
VRQSANYTCVAMSTLGVIEAVSQITVKALPKPPGTPVVTESTATSITLTWDSGNPEPVSY
YIIQHRSKSEETYKEIDGVATTRYSVGGLSPYSEYEFRVVAVNNIGRGPPSEPVETRTAE
QAPSTAPRQVTARMLSSTTILVQWEEPEEANGQIQGYRVYYTMEPSQHVNNWQKHNVGDT
HITTISGLTPQKTYHVKVLAFTSVGDGPLSSDIQVITKTGVPAQPTNFKAEAKSETSILL
SWVPPKGDSIIGYELVYKKGEQGEEQHVTFEPDTSYLLQGLKPFTNYFFRLAARSSYGQG
AATTEISAETPQTQPSAPPQDIKCTSPSSTSILVSWLPPPLELQNGFITKYSIQYATIEG
EDTNPRQISGLSPETSQYLLEELEKWTEYRVTVSAHTDVGPGPESLPQIIRTDEDVPSGP
PRKVEVEAVNSTSIKVIWRSPVPNKQHGQIRGYQVHYVKMDNGEPRGQPMIKDIMLADAQ
WEFDDSTEHEMVISGLQPEMTYSVTVTAYTTKGDGARSKPKLVSTTGAVPGRPRLLVSPT
QMGTALIQWHPPVETFGPVQGYRLKYGRKDTDLLTILEFSEKEDHFTATDIHKGASYVFC
LSARNKVGFGEEIVKEISIPEDVPSGFPQNIVADSPTSTTFQLSWQPPVLSEQNGVIVKY
TVLYKDINSPNNPSELIVMPPETTVKISGLKADATYDIKIRAYTSKGAGPYSPSVQFRTQ
PLDQAVFAKNFHVKAAMKTSVLLTWEIPESYNPAQPFTILYDNGQSVEVDGNVTQKLIIN
LQPGTQYSFLLTNRGNSAGGLQHRVTAMTAPDVLRTKPYFIGKTNTDGMLTVELPAVQTT
EKVKAYYIVVVPLKKQRGKFIKPWVSPDEMNLEELLKEINRTSRSLRFRRQAEPKSYIAA
YFKELPTEFTLGDQKIYGDFENKPLQNGQEYIFFVLAVLEISDNTMYSTSPYSDPVVSAD
IDPQPIIDEEEGLIWVVGPVLAVVFIICIVIAILLYKSKPDSMTSQSNLLTGREQSVYRK
RAESDSRKNSIPNSKEIPSHHPTDPVELRRLNFQTPGSGVSGYPGNLHSSSMASHPPIPV
MELADQLERLKANDNLKFSQEYESIDPGQQFTWEHSNLEVNKPKNRYANVIAYDHSRVLL
SAIEGIPGSDYVNSNYIDGYRKQNAYIATQGPLPETFGDFWRMIWEQRSANIVMMTKLEE
RSRVKCDQYWPTRGTETYGLIQVTLLDTVELATYCVRTFALYKNGSSEKREVRQFQFTAW
PDHGVPEHPTPFLAFLRRVKACNPPDAGPMVVHCSAGVGRTGCFIVIDAMLERIKHEKTV
DIYGHVTLMRAQRNYMVQTEDQYIFIHDALLEAVTCGTTEVPARNLYAYIQKLTQIESGE
NVTGMELEFKRLANTKAHTSRFISANLPCNKFKNRLVNIMPYESTRVCQQPIRGVEGSDY
INGSFIDGYRQQKAYIATQGPLAETTEDFWRMLWEHNSTIVVMLTKLREMGREKCHQYWP
AERSARYQYFVVDPMAEYNMPQYILREFKVTDARDGQSRTVRQFQFTDWPEQGVPKSGEG
FIDFIGQVHKTKEQFGQDGPISVHCSAGVGRTGVFITLSIVLERMRYEGVVDIFQTVKML
RTQRPAMVQTEDQYQFCYRAGLEYLGSFDHYAT
NT seq
5862 nt
NT seq
+upstream
nt +downstream
nt
atgctggtgccaagctgtcggatgatgcacatagccaggccagtggtggtgctcctgtgc
tttcttctcttagcagatgctgaaataccaccaaagtttacacgaactccagatgatcaa
acaggagtgtcaggaggggtagcatcattcatttgccaagccacaggagacccaaggcct
aagattgtgtggaataagaaggggaagaaagtcagcaaccagagatttgaggtgatagag
tttgatgatggatctgggtctgtgctaagaattcagcccctgcgtaccccccgagatgag
gctatatatgaatgtgttgcctccaacagtgttggagagacaagttcctccaccagactc
actgtattacgtgaggaccagctcccttctggttttcccaccatagacatgggcccacaa
ctgaaagtggtagagcgcacgcgcacagccaccatgttatgtgcagccagcggaaaccct
gatccagaaattacctggttcaaagacttcttacccgttgacacgactaacaataatggc
cgcatcaagcaattacgatcagaatcctttggtggtacaccaataagaggtgccctccaa
attgagcagagtgaagaatctgaccagggaaaatatgaatgtgttgcaaccaacggtgct
ggtacacgatattctgcccctgccaatctatatgtcagagagctgcgagaagtacggcgt
gtccctccaaggttctctatccctccaacaaaccacgagatcatgccaggcggcagtgtg
aatatcacatgtgtggcagtgggttcccccatgccctatgtgaagtggatgttgggggct
gaagacttgactcctgaagacgacatgcccattgggaggaatgtactcgagcttacagac
gtgaggcaatcagccaactatacctgcgtggccatgtcaactcttggtgtcattgaggct
gtttcacaaattactgtgaaggctttgccaaagcctcctggaacccctgtggtgaccgaa
agcacagccacaagcattacactgacatgggactctgggaatccggagcctgtttcttat
tacatcatccagcatagatcaaagtctgaagagacatacaaggagatagacggggtggcc
accacacggtacagcgtgggaggcctcagtccgtactctgaatacgagttcagggtggtg
gcagtgaataatataggaaggggcccaccgagtgagccagtggaaactaggactgctgaa
caggcccccagcactgcgcctcgtcaagtaactgcacgaatgctcagttccaccaccatc
ctggtccagtgggaggagccagaggaggcaaatggacagatccaaggctaccgagtttat
tacaccatggaacccagccagcacgtcaacaactggcagaaacacaacgtgggtgacact
cacattacaaccatcagtggcctcactccacagaaaacctaccatgtcaaagtgcttgcg
ttcacctctgttggagatgggcccttatcaagtgacatccaggttataactaagacagga
gttccagctcagccaactaacttcaaagccgaagcaaagtctgaaaccagcatactgtta
tcatgggtgcctccaaaaggagactcaatcattggttatgagcttgtttacaaaaaaggg
gaacaaggagaagagcaacatgtcacttttgagcccgacacgtcctatctgttgcaggga
ctgaaaccctttacaaactacttcttccgtctggctgcccgctcctcatatggccagggt
gctgccactacagagatatcagctgaaaccccacagacacagccctcggctcctccacaa
gacatcaagtgcactagccccagctccaccagcattctggtaagttggctaccaccacca
ttggaactgcagaatggattcattaccaagtactctatccagtatgccaccatcgaagga
gaggacacaaacccccgtcaaatctcaggcctctcccccgaaacctcccagtacctcttg
gaagagttggaaaagtggaccgagtatcgagtgacagtgagcgcccacacagatgttgga
ccgggccctgaaagcttgccccagatcatccgcaccgacgaggatgttcccagcggtccc
cctcgtaaagtcgaggtggaggctgtcaactccacatcaattaaagtgatttggcgttca
cctgtccccaacaagcagcatgggcaaatccgaggataccaggtgcattatgtgaagatg
gacaatggagagccaagaggacagcccatgattaaggacatcatgcttgctgatgcacag
tgggaatttgatgattctactgaacatgagatggtaatttctggtcttcagcctgaaatg
acgtactctgtcactgtgacagcttacacaactaaaggagatggagctcgcagcaagccc
aagctggtgtcaacaactggtgcagttccaggaaggcccagactcctagttagtcccacc
cagatggggacagctctaattcagtggcacccaccagttgagacctttgggcctgtgcaa
ggttaccgtctcaaatatggccgcaaggacaccgaccttctaaccatactagaattttcc
gaaaaggaagaccacttcaccgccacggacatccacaaaggggcctcctatgtcttctgt
ctttccgccaggaacaaagttggctttggtgaagagatagtgaaggagatctcaattcct
gaagatgtgccgagtggcttcccgcaaaacattgttgccgacagtccaacttcgaccact
ttccagcttagctggcagcctccggtgttgtctgagcaaaacggtgtcattgtcaaatat
actgtgttatacaaagatattaacagccccaacaacccgtccgaactcattgtcatgcct
ccggaaaccacagtgaaaattagtggtttaaaagcagacgcaacgtatgatataaaaata
cgcgcatataccagcaaaggggctggcccttatagcccaagtgtccagttcaggacacag
ccactggatcaagcagtgtttgcaaaaaattttcatgtgaaagccgcaatgaagacatca
gtgctgctaacctgggagattccagaaagctataaccctgcccagcctttcacaattctc
tatgacaatggacaaagtgttgaggtggatgggaatgtcacgcaaaaactgatcatcaac
cttcagccgggtacccagtactccttcttactgacgaatcgagggaacagtgccggggga
ctccagcaccgtgttacagccatgactgcaccggacgtactgcgcactaaaccctacttc
atagggaaaaccaacacggatgggatgttaactgttgaacttcctgctgtgcaaacaaca
gagaaagtaaaggcatactatatagtggtggtgcctttgaagaaacaacgtggaaagttt
atcaagccctgggtcagtccagatgagatgaatctggaggagctactcaaagagattaac
agaacaagcagaagcctccggttcaggaggcaagcagagcccaaatcctacattgctgct
tatttcaaagagctccccactgagttcactcttggagaccagaagatctatggcgacttt
gaaaacaagccactccaaaatggtcaagaatatatcttttttgttttggctgttctggag
atctccgataatacaatgtactctactagcccatattcagatccagtagtttctgctgac
attgatccccagccgatcatagatgaggaggaaggattgatctgggtggtggggccagtg
cttgctgtcgtgttcattatctgcattgtcattgccatactcctctacaagagcaaaccc
gacagtatgacatcacaatcaaatttactgactggcagggaacaatcagtctaccggaaa
agagcagagtctgactccagaaagaacagcattcctaatagtaaggagatcccctcccac
cacccgacagatcctgtggaactcaggcgcctcaatttccagaccccaggttcaggtgtc
tccggttaccctggtaacctccattcgtcaagtatggccagccacccccctattcccgtc
atggaacttgctgatcaacttgaaaggctaaaggcaaacgacaacttgaagttttcacaa
gaatatgagtctattgatccaggccagcagtttacatgggagcactccaacctggaagtt
aataaaccaaagaatcgatacgcaaatgtgattgcatatgaccattcccgggtcctgctt
tctgctattgaaggtattcctggcagtgattatgtcaattccaactacattgatggctac
agaaagcagaatgcctatattgcaacacaaggccccctcccagagacatttggtgacttt
tggagaatgatttgggagcaacgcagtgccaacattgtcatgatgactaagctggaagaa
agatcaagggttaagtgtgaccaatactggcctacaagaggaactgaaacctatgggttg
atccaagtgacattactagatacggtggaactggcaacctactgtgttaggacatttgca
ctttataagaatggttctagtgaaaagagagaagtccgacaattccagtttacagcctgg
ccagaccatggtgtccctgaacatcctacaccattcctagcctttttacgtcgtgtcaaa
gcctgtaacccaccagatgctgggccaatggttgtacactgcagtgctggcgttggcaga
actgggtgcttcattgtaatagatgccatgttggagaggataaaacatgagaagactgta
gatatttatggccacgttactctaatgagagctcagaggaattatatggttcagacggag
gaccaatatatctttatccatgatgcactgctggaagcggtgacatgtggaactacagaa
gtgccagccagaaacctgtatgcatacattcagaaactgacacagatagaatcgggggag
aatgtaactggaatggaactggaatttaagcgtttagccaacactaaagctcatacgtca
cgattcatcagtgccaatcttccatgtaacaaattcaagaaccgccttgttaatataatg
ccatatgaatccacaagagtatgccaacagccaatccgaggggtagaaggctcggattat
ataaatggcagttttattgatggatatagacaacagaaagcctacattgccacacaggga
cccttagcagagactacagaggacttctggaggatgctttgggagcacaactccacaatt
gttgtcatgcttacaaagctcagagaaatggggagggaaaaatgtcatcagtactggcct
gcagaaagatctgccaggtatcagtactttgtggtggaccccatggcagaatacaacatg
ccccaatacatcctgagggagtttaaagtgactgatgctcgggatggacagtctcggaca
gtaaggcagttccagtttactgattggcccgagcaaggagtgccaaaatcaggcgaaggg
tttattgacttcattggccaagtgcataaaacaaaagaacagtttgggcaggatgggcca
atatcagttcattgtagtgctggtgtcgggaggactggtgtttttattacactcagcatt
gtcctggagagaatgaggtatgagggggtggtggatatattccagactgtcaaaatgtta
aggacacagaggccagccatggtacagacagaggatcagtaccagttttgctatcgagcc
ggattggaataccttggaagctttgatcactatgcaacgtaa
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