Polyodon spathula (Mississippi paddlefish): 121295979
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Entry
121295979 CDS
T07273
Symbol
irx3a
Name
(RefSeq) iroquois-class homeodomain protein IRX-3a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121295979 (irx3a)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121295979 (irx3a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
MRP-S32
Motif
Other DBs
NCBI-GeneID:
121295979
NCBI-ProteinID:
XP_041077022
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Position
21:complement(1313261..1317639)
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AA seq
452 aa
AA seq
DB search
MSFPQLGYQYIRPIYPSDRQGISSARTGAELTPSGALSNVLSSMYGSPFAAAQGYGAFLP
YANDISIFPQLGAQYELKDSPGVQHAGYPHPHAAFYPYGQYQFGDPSRPKNATRESTSTL
KAWLGEHRKNPYPTKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWAPRSRTDEE
GNVYGSDHEEEGDKREDDEEIDLENIDTENIESKDDLDDQEDPDLHPDLKLDGRSDSEVS
DGYEDLHGHDERFLKSVVKESRDVDGDSKGDHHHALETKATQSSGDQLKINPVSVSSPPS
ENNAAPLQKPKIWSLAETATTPDNPRKSPQMTGPATGPVAQTLLASHRLISCPVGKLQGW
TNRAFSAHQLALINSNHYLGLSAANQATTNAGIAAYNRLQEQQTHSTDSSVTDRCSALEE
ENKLLKTAFHPVQRRPQNQLEAAMVLSALSSS
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgtctttcccgcagctggggtaccagtatatcaggccaatatacccctcggaccgccag
gggatcagcagcgcacgaaccggggcagagctcactccgtccggggctctttccaatgtt
ctctccagcatgtacggatccccctttgcagccgcacagggatacggagcttttcttcct
tatgctaacgatatttcaatttttccacaactgggtgctcagtatgaactgaaagacagc
cccggggtccagcacgcaggatacccgcaccctcatgccgctttctacccttacggccag
tatcagtttggtgacccctccagacctaaaaatgcgacccgggagagtaccagcaccttg
aaggcctggctcggcgagcacaggaaaaacccttaccccaccaaaggggagaagatcatg
ctggccatcatcaccaaaatgaccctgacacaagtgtccacctggttcgccaacgccagg
aggagactgaaaaaggaaaacaaaatgacttgggctccgagaagccggaccgacgaggag
ggtaacgtttatggcagcgatcacgaagaagagggggacaagagagaagacgacgaagaa
atcgatttggaaaatattgacacggaaaatatcgaaagcaaggacgatctggatgatcag
gaggatccagacctgcatccagacttaaaactggacgggaggagtgactcggaggtttca
gacggctatgaggacttacacgggcacgacgagaggtttttaaaatctgttgttaaagaa
agcagagacgttgatggagacagcaagggggatcaccaccatgcgttagaaaccaaagca
acacaatccagcggtgaccagcttaaaatcaaccccgtctctgttagttctccaccttca
gaaaacaacgcggcccctcttcagaaaccaaaaatatggtctttggcagagaccgccact
actccggacaatcctagaaagtcaccccaaatgaccggcccagctaccgggcctgtagca
cagactctcctcgcctctcacagactgatctcctgtcctgttgggaaacttcagggctgg
acaaacagagctttttctgcccaccagctagctttaataaactcaaatcattacttagga
ctgtccgcagcgaaccaggctacaacaaacgcggggattgcggcgtataacaggctccaa
gagcagcagactcacagtacagactcctctgtaacagacagatgcagtgctttggaagaa
gaaaataaattattaaaaacagcgttccaccccgttcagagacgacctcagaaccagctt
gaagccgcgatggttctatcggcgctgtcttcatcatag
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