Polyodon spathula (Mississippi paddlefish): 121296022
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Entry
121296022 CDS
T07273
Name
(RefSeq) TBC1 domain family member 24-like
KO
K21841
TBC1 domain family member 24
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121296022
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pspa03037
]
121296022
Membrane trafficking [BR:
pspa04131
]
Endocytosis
Arf GTPases and associated proteins
Arf associated proteins
121296022
Cilium and associated proteins [BR:
pspa03037
]
Other cilia and associated proteins
Stereociliary proteins
121296022
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TLD
RabGAP-TBC
RabGap-TBC_2
Motif
Other DBs
NCBI-GeneID:
121296022
NCBI-ProteinID:
XP_041077093
LinkDB
All DBs
Position
21:28677544..28683648
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AA seq
646 aa
AA seq
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MNIPEINIPDVPNIAGGMRARSATFTARQRSNSSYSTDGTTGILPGFRRHSISIPVLVIS
DSDHYDVGTSSGLKYGKFVDWEKMPAVSSKSCMEPLPSDPKVLKSMARAGCWSKNHTVRA
KAYNHIIRSIRCRAVTPDDAVYRDISGKLFGQKKVSTHPFPQFMKESQIPMYCLNKGGLN
AVKKVLVCLENQFPDITYCPVLPAIVSLLLHYSEDEAECFQNACKLIACNDPDMHYVDQT
FLAYQSSCMTFGDLAKKYCHGAHKLIATTDHNRVSVYSEWMMWLFGGLPFEYATRVFDVY
LLEGFKVLYRVALALLKQYRVSVTSRESEITDLQQDIQSFVASIAHHLTVDKFLEKAFSI
RLFSGKEISLLQIANRKALAQKGITHTQRRQSVHMAIDLQRFSSGVVTAQEMRIIWSWIP
ERFALFHPTLLFTTSEHGYSLQTLYSRVEGYEPTVLLFKTLDEEVSGAFLSSDWSERNKN
GGKDSFFGTGECFVFTLRPEMERYEWMTLHPVESVSEEEFPKARLRSRSFTPSGSRPDTS
ASSLSTAGTSQDSSLLTVPLTEPRPAHFRSVPHLPTKTASMFMAGSRDGIIIGGGGGQAL
YIDGDLHRGSTQHCDTFNNPPLCKESFQIQLLEVWGIHSSVQNTVC
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaatattcctgaaataaatattccagatgttccgaacattgctggggggatgcgggcc
aggtccgcgaccttcaccgccagacagagatccaactccagctacagcacagacgggact
acaggcattctccctgggttcagaaggcactccattagcattccagtgcttgtcatatca
gattctgaccattatgatgtgggcacatcttctgggctgaaatatgggaagtttgttgac
tgggaaaaaatgccagctgtgtcttccaagagctgcatggagcccctacccagtgatccg
aaggtactgaagagcatggccagggcaggttgctggtcaaagaaccacactgtacgggcc
aaggcctacaaccacatcatcagaagcatacgttgccgagcagtcacccccgatgacgct
gtctaccgggacatatcagggaagctgttcgggcagaagaaggtgagcactcatcctttc
ccacaattcatgaaagaaagccagatccccatgtactgtctcaacaagggtgggctcaac
gcggtcaagaaggtcctcgtctgccttgagaaccagttccccgacatcacatactgccca
gtactccctgccatcgtgtctctgctcctccattacagtgaagacgaagcagagtgcttt
cagaatgcttgcaagctcatagcttgcaatgacccagacatgcactacgtagaccaaacc
ttccttgcttaccagtcctcttgcatgacttttggggacttggccaagaagtactgccac
ggcgcccacaagcttatagcaaccacggaccacaatcgcgtctcggtctactcggagtgg
atgatgtggctcttcggtggcctcccttttgagtacgccactcgggtgttcgatgtctac
cttctggaaggcttcaaagtgctctaccgggtcgcgcttgcactactcaagcagtacaga
gtctcggtgacatccagggagtcggagatcactgatcttcagcaggacatccagagcttc
gtggccagcatcgcgcaccacctgacagtggacaagtttcttgaaaaggcctttagcatc
cggctgttctcaggcaaagaaatcagcctcctacagatagccaacaggaaggcactggca
cagaagggcatcacccacacccaaaggaggcagtctgtgcacatggcgatagaccttcaa
cgcttcagctctggcgttgtgactgcgcaggagatgcgtatcatctggtcctggatccca
gagagattcgccctcttccatcccaccctgctcttcaccaccagcgagcacggctacagc
ctgcagacgttgtactcgcgtgttgaaggttatgagcccacggtgcttctgttcaagacc
ctggatgaagaggtgtctggagccttcctctcgtcagactggagtgagagaaataaaaat
ggtgggaaagacagcttttttgggactggagaatgctttgtttttactctgcgtcctgag
atggaaaggtatgagtggatgacattgcaccctgttgagtctgtatcagaggaagagttt
cccaaggcacgtctgcgctctcgctccttcacaccctcgggctcccggcctgatacctcc
gcctcctctctctccaccgcagggaccagccaggacagcagcctcttaactgtgcccctc
acagagcctcggccagctcacttccgctccgtgccacaccttcccaccaaaacagcctcc
atgttcatggccggaagcagagatgggatcatcatagggggcggtggagggcaggctctg
tatattgatggggatctgcaccgtgggagtacgcagcactgtgacaccttcaataacccc
cctctctgcaaggagagcttccaaattcagctgcttgaagtctggggcatccacagctct
gtacaaaacactgtgtgctga
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