Polyodon spathula (Mississippi paddlefish): 121296037
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Entry
121296037 CDS
T07273
Name
(RefSeq) rab11 family-interacting protein 4A-like isoform X1
KO
K12485
Rab11 family-interacting protein 3/4
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121296037
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121296037
Membrane trafficking [BR:
pspa04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
121296037
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_7
EF-hand_9
EF-hand_6
EF-hand_8
EF-hand_1
bZIP_1
SPEF2_C
ZapB
Flagellin_C
Motif
Other DBs
NCBI-GeneID:
121296037
NCBI-ProteinID:
XP_041077120
LinkDB
All DBs
Position
21:29243234..29293513
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AA seq
519 aa
AA seq
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MDGNGFPDQEQLLQFLKKLKEVFDVCDEDDDGYIRVEHFIDLGLQFGQGDEVQKLTKYLD
PNELGRINFKDFCHGVFAIKGCEEILKNALGARSALCRQYEAEYEEYYYQRGEEVLGRPY
VVCDQAYGECEIFPTDEDGMTLPQRDSHRESDMDSAIGSTHSSEASDLCRGEDKEEGLGG
LFLPTDKSIPHNLSAASDLSTHSTASLISNEEQFEDYGEGEDVDYTPSSPCPDDETRTNG
FSDLGSSVSSSAGQTPRKMRHIYNNDLLDVYCSQCCKKINLLNDLEARLKNLKANSPNRK
ITSTAFGRQLFHNSNFSSSNGSTEDLFRDSIDSCDNDITEKVSSLEKKVTELENDSSLNG
DLKGKLKQENTQLVHRVHELEEQIKDQEARAEQVLEEEIKRHREAYVKMEREKSTEIELL
NNRVQQLEDENGEMGSSVNRLKSQTEKLDEERQRMTYKLEDTSLRLKDEMDLYKKMMDKL
RQNRHEFQKEREATQEVRERERERERAREREREHYGSHL
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggacgggaatgggtttccggaccaggagcagctgctgcagtttttaaagaaactcaaa
gaggtctttgacgtgtgtgacgaggacgacgatggttacattcgtgttgagcatttcatt
gatctcggattgcagttcgggcaaggagacgaggtgcagaagctgaccaaatatctggac
cccaatgagctgggcaggataaactttaaggatttctgccatggcgtgtttgctataaaa
ggttgtgaagaaatattgaaaaatgcattgggggctaggagtgccctgtgtcgtcagtat
gaggcagagtatgaggagtattactaccagcgaggggaggaggtgctgggacgcccctac
gtggtctgtgatcaagcgtacggagagtgcgagatcttccccactgatgaggacggcatg
acgctgccccagagagacagccaccgtgagtcggacatggacagcgccatcgggagcacg
cacagctctgaggcttccgacctgtgcaggggagaggacaaggaggaggggctggggggg
ctcttccttcccacagacaagtctatcccacacaacctctcggctgcgtcggacctgtcc
acgcactccaccgcctcgctcatcagcaacgaggagcagttcgaggactacggggagggg
gaggatgtggactacactcccagcagcccctgccctgacgacgaaaccaggaccaacggc
ttctctgaccttggctcctccgtctcctccagtgctggccaaacccccaggaagatgagg
cacatctacaacaatgacctgctggatgtgtactgctcccagtgctgcaagaaaatcaat
cttctcaatgacctggaggccaggctgaagaacctgaaagccaacagtcccaacaggaaa
ataacaagcaccgcctttggacggcaactgtttcacaacagcaacttcagcagcagcaat
ggcagcacagaggatctgttcagagacagcattgattcctgtgacaacgacatcaccgag
aaggtgagctctctggagaagaaggtgacggagctggagaatgacagctcgctgaacggg
gacttgaagggcaagctgaagcaggagaacacacaactggtgcacagagttcatgagctg
gaggagcagataaaggaccaggaggcacgagcagagcaggtgctggaggaggagatcaag
aggcacagagaggcctacgtgaagatggagagggagaagagcacagagatagagctgctc
aacaacagggtacagcaactggaagatgaaaacggggaaatgggcagcagcgtaaacaga
ttaaaatcacaaacagagaaactggatgaggaaaggcagcggatgacatacaagctggag
gacaccagcctgcggctgaaggatgagatggatttgtacaagaagatgatggacaagctg
agacagaaccggcatgagttccagaaggagagagaggcaacgcaggaggtgagagagaga
gagagagagagagagagagcgagagagagagagagagagcattatgggtcacacctctaa
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