Polyodon spathula (Mississippi paddlefish): 121296056
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Entry
121296056 CDS
T07273
Symbol
exosc6
Name
(RefSeq) exosome complex component MTR3
KO
K12587
exosome complex component MTR3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
121296056 (exosc6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121296056 (exosc6)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
121296056 (exosc6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
121296056
NCBI-ProteinID:
XP_041077156
LinkDB
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Position
21:complement(2419..3440)
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AA seq
272 aa
AA seq
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MPVDNKRVRGPEESQSPWLFVQQTRVPQTSESERRADGRRRGQVDARPMFARCGLVSQAK
GSAYIEAGNTKLICSVYGPRETERKDELDMRAGRLVCAFRLAPFSCAKRCPWIQGSQEKD
LTLSLQESLQPGVCLHRYPRSQIEVNVLVLENDGSALAHAITCASLALADAGIEMYDLVI
GCSLRQDGAAYLLDPTCCEETGDESTENQGSLTVALLPTLNQISGLLSTGEMKEETVVGA
IRACVEGCQRLYPAAQQCLLKAVRRKVPAPQN
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
atgccggtggataataagcgagttcggggaccagaggaatcccagtcgccctggctgttc
gtgcagcagacccgggtcccccagacaagcgagtcagaaagacgggcggacggcaggcgg
cggggccaggtggatgcgaggccgatgtttgctcgctgtggactggtgagccaggccaag
ggctctgcctatatcgaggctgggaacacgaagctgatctgctcggtgtacggaccgcgc
gagacggagaggaaagacgagctggatatgagggcgggcaggctggtgtgcgctttccga
ctcgctcccttctcttgcgcgaaacggtgcccatggatccagggcagccaggagaaagac
ctaaccctgagcctgcaggagagcctgcagcccggggtttgcctgcacaggtacccgcgg
tcgcagatcgaggtgaacgtgctggttttggagaatgacggctctgctctggcacacgca
atcacctgcgcctccttagctctggccgatgccgggatcgagatgtacgacttggtaatc
ggatgctcgttaagacaagacggtgctgcgtatttgctcgacccgacctgctgcgaggaa
accggggacgagtcgactgagaaccaagggagcttgactgtggcgctgctacccacccta
aaccagatctcagggctgctctccaccggggagatgaaggaggagaccgtggtgggagcc
atcagagcctgtgtcgagggctgccagcgactgtacccagcagctcagcagtgcttgcta
aaagcggtgcggcggaaggttcctgccccgcagaactga
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