Polyodon spathula (Mississippi paddlefish): 121296188
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Entry
121296188 CDS
T07273
Symbol
pard6a
Name
(RefSeq) partitioning defective 6 homolog alpha
KO
K06093
partitioning defective protein 6
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04144
Endocytosis
pspa04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121296188 (pard6a)
09144 Cellular community - eukaryotes
04530 Tight junction
121296188 (pard6a)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121296188 (pard6a)
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Pericentriolar materials (PCM)
Centriolar satellite
121296188 (pard6a)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PB1
PDZ
PDZ_6
DUF5600
Motif
Other DBs
NCBI-GeneID:
121296188
NCBI-ProteinID:
XP_041077397
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All DBs
Position
21:2806870..2831544
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AA seq
374 aa
AA seq
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MVHNAETVRHLPKMSRHHRTPSRNANNIIEVKSKFDAEFRRFALKRSSVGGFQEFYRLIQ
SVHQIPSVDLLMGYTDIHGDLLPINNDDNYHKALSSANPLLRIIIQKRAEADTGVFATNS
LQRRKKGLHGLRPVHKSKPHLLIGLPQDFRQISSIIDVDILPETHRRVRLHKHGSDKPLG
FYIRDGLSMRVTPQGVEKVPGVFISRLVRGGLAESTGLLAVNDEILEVNGIDVVGKSLDQ
VTDMMVANSHNLIVTVKPANQRNNVVRSSKGFSNNSTPSPVSHYISNYSTAEGESDDEGD
LIIESDGLPPYLHTGFVNGDHPGVLRSFQQSTSLHSSLSDSKASLSSTNTHNGSPGKVNT
SRESMREDGNVITL
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atggtccacaacgcggagactgttcgccacctgcccaaaatgtcaaggcatcacagaacc
ccttcgagaaatgcaaacaacattatcgaggtcaaaagcaaatttgatgcggagttccga
aggtttgccctgaagcgttcgagcgtgggagggttccaggaattctaccggctgattcag
tcggtccatcagattcctagtgtggacttgctaatgggatatacagacatccatggggat
ttactgccaatcaacaatgacgacaactaccacaaagccctgtcctctgccaacccgctg
cttaggatcatcatccagaagagagcggaagccgacactggggttttcgccaccaactcc
ctgcagcgcaggaagaaggggctccacgggttgcggccggtgcacaagtccaagccgcac
ctcctgatcgggctcccacaggacttccggcagatctcctccatcatcgacgtggacatc
ctgcccgagacccaccggcgcgtgcgtctgcacaagcatggctcggacaagccccttggc
ttctacatccgcgatgggctgagcatgcgggtgaccccccagggagtggagaaggtgccg
ggggtgttcatttctcggctggtgcgcggcgggctggcggagagcacggggctgctggcg
gtcaacgacgagatcttggaggtgaacggcatcgacgtagtgggcaagtccctggaccag
gtgacggacatgatggtggccaacagccacaacctcattgtgacggtcaagccggccaac
cagcggaacaacgtggtccggagcagcaagggcttctccaacaacagcacccccagcccg
gtctcgcactacatcagcaactacagcacggctgagggggagagtgatgacgagggagac
ctgatcatcgagagcgacggcctgcccccctacttgcacaccggcttcgtcaacggggac
cacccgggcgtactgcgcagcttccagcagagcacctccctgcacagctcgctgtctgac
agcaaggcctcgctcagctccacaaacactcacaacggcagccccggcaaggtcaacacg
agccgggagagcatgcgggaggacggcaacgtcatcacgctataa
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