Polyodon spathula (Mississippi paddlefish): 121296194
Help
Entry
121296194 CDS
T07273
Symbol
irx6a
Name
(RefSeq) iroquois-class homeodomain protein IRX-6a
KO
K24889
iroquois-class homeodomain protein IRX
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121296194 (irx6a)
Transcription factors [BR:
pspa03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
121296194 (irx6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Motif
Other DBs
NCBI-GeneID:
121296194
NCBI-ProteinID:
XP_041077406
LinkDB
All DBs
Position
21:1642323..1647898
Genome browser
AA seq
492 aa
AA seq
DB search
MLTKGAAMSFSQFGYPYNSSSQFFRSANPSTTCCDSACRSLPDGSSGTAHAAAALCCPSY
ENRLLASTRTELNAALGMYGSPYAAASQNYANYFPYSTDPSTLYSALNPQYDIKDGTGSL
HSGIAQSAAYYPYDHSLGQYQYDRYSTIDFNGSARRKNATRETTSTLKTWLYEHKKNPYP
TKGEKIMLAIITKMTLTQVSTWFANARRRLKKENKMTWSPKNKPGDERKDDLEKEDRDDC
NLERLDKNSKECKESDSRLSDLDDTDDEECSKLDSDCEKIPHQDQSLQRDMTAEPQKNDC
NLTITRNHFHAFACNKNESSMAPGVLENAITKMSTIAPNNGVVPHHYETSKKNRIWSLAR
TAAGGVILGTHNSEERTVNANCQLRERHSTVSGAHCSELRVQQEARSRSTNGHAFEALPQ
SNKVYRTSIFNQESLQLHCSSYPVLSDTCQYSSGMEGFSQNVKSDQGPTELREECLIQQD
DKITAFRSVLKR
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgttaacaaaaggagcagcaatgtccttctctcagtttggatatccttacaacagcagt
tcgcagttttttaggtctgcaaaccccagcacgacttgctgtgattcagcctgcaggtct
ctgcccgatggctcttctggtacagcccacgctgcagcagctttgtgttgcccgtcttac
gagaacagattgctggctagcactcgaacggagctcaacgcagctctgggcatgtacggc
tctccctatgcagcagccagccagaactatgctaactatttcccctatagcaccgaccca
tccactctctactcagcactgaaccctcagtacgacattaaggacggcactggaagtttg
cattcggggattgcgcaatctgctgcctattacccctacgaccactccctggggcagtat
cagtacgacagatatagcaccattgattttaatggttcagccaggcgcaaaaacgccact
cgggaaaccactagcacactcaaaacgtggctgtacgagcacaagaaaaacccttacccc
accaaaggggagaagatcatgctggccatcatcaccaaaatgaccctgacacaagtgtcc
acctggttcgccaacgccaggaggaggctgaaaaaggaaaacaaaatgacctggtcccca
aaaaacaaacctggagacgaaaggaaagatgaccttgaaaaggaagacagggatgactgt
aacctggaaagattagataaaaattcgaaagaatgtaaagagagtgattcgaggctgagt
gatctggatgacacagacgatgaggaatgctcaaagctggacagcgactgtgagaaaata
cctcaccaagaccagagcctccagcgagacatgacggcggagccacagaaaaatgactgc
aacttgacaattacgcgcaatcatttccatgcgtttgcatgcaataagaacgagtcgtct
atggcgccgggtgttttagaaaacgcaataactaaaatgtcaaccatagcaccaaacaat
ggcgttgttcctcatcattatgaaacatcaaaaaaaaacagaatttggtctttagcgcgt
actgcagccggcggtgttattttgggaactcataacagtgaagaaaggactgtaaatgca
aactgccagctccgggaaaggcattctacggttagtggcgcacattgtagcgaactaagg
gtacagcaagaagcaaggagccggtctaccaacgggcatgctttcgaggccctcccacag
tctaacaaggtttatagaacttccatctttaaccaggagtctctccagttgcattgttct
tcctatcccgtgttgtccgatacgtgccaatattcgtcaggaatggaaggtttttcacaa
aatgtgaaatctgaccaaggacccacagaactccgtgaagagtgtctaatacaacaggac
gacaaaataactgcattcaggtctgtgctgaagaggtga
DBGET
integrated database retrieval system
