Polyodon spathula (Mississippi paddlefish): 121296218
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Entry
121296218 CDS
T07273
Symbol
tradd
Name
(RefSeq) tumor necrosis factor receptor type 1-associated DEATH domain protein
KO
K03171
tumor necrosis factor receptor type 1-associated DEATH domain protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04010
MAPK signaling pathway
pspa04210
Apoptosis
pspa04217
Necroptosis
pspa04622
RIG-I-like receptor signaling pathway
pspa04920
Adipocytokine signaling pathway
pspa05132
Salmonella infection
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
121296218 (tradd)
09140 Cellular Processes
09143 Cell growth and death
04210 Apoptosis
121296218 (tradd)
04217 Necroptosis
121296218 (tradd)
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
121296218 (tradd)
09152 Endocrine system
04920 Adipocytokine signaling pathway
121296218 (tradd)
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121296218 (tradd)
09171 Infectious disease: bacterial
05132 Salmonella infection
121296218 (tradd)
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Gene cluster
GFIT
Motif
Pfam:
TRADD_N
Death
TRADD-like_N
Motif
Other DBs
NCBI-GeneID:
121296218
NCBI-ProteinID:
XP_041077464
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Position
21:2360449..2371801
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AA seq
320 aa
AA seq
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MEKLTSSSGSGGWTGSAFLFLQSNLQQVDLPVLYKNPEQKINVFKALKLTLSDSAGGLDG
YEILKVHDTDSDLIIQIKFSDEMHCMAFLESYASGGLKQCLGQHLRAVLSVTEELEFDIK
LKAGRKTLDDFLKDRDRCLRCIKEAQPDRLKDDEVAQLEKALQSLMLNDRHPSEAMHKGS
FSSSSSSSSKPLSPAIPPNSREEGSLLPSNSFKFQGRVYDDRRLTSSDHQKFAFEIGKQW
KKVGRSLQKGCRALKDPAIDNLAYEFDRDGLYEQAYQMLNKFRQSEGKKAKLSRLISALE
ENGLMGIAERMLDIQPAERQ
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
atggagaaactgacctcaagcagcggatctggggggtggactggtagtgcttttctcttc
cttcagtcgaacctccaacaggtagatcttccagtcttgtacaaaaacccggaacagaaa
atcaacgttttcaaagctcttaagctaacactatcagattctgcgggtggcctggatggg
tatgaaattctgaaagtacacgacacagactcagacctgataatccagatcaagttctct
gatgagatgcactgcatggcatttctcgagagctacgccagtggaggcctgaagcagtgc
ttaggtcagcacctgagggctgtgctctccgtcacagaggaactggagtttgatattaaa
ctcaaagctggcagaaaaacgctggacgattttctcaaagatcgagatcgctgtctgcgc
tgcatcaaggaggcccagcctgatcggctgaaggatgatgaagtagcccagctagagaag
gctctccagagtttgatgctgaatgacaggcatccctctgaagccatgcacaaagggtcc
ttctcctcctcctcctcctcctcctccaagcctctgtccccagccatacccccaaactct
agagaagaaggctctctgctcccgagcaacagtttcaagttccaagggagagtttacgat
gacaggcggctgacctcctcggatcaccagaagtttgcctttgaaatcggcaagcagtgg
aagaaggtgggccgctctctgcagaaaggatgcagagccctgaaggaccctgccatcgat
aacctggcctatgagttcgacagagacggcctctatgagcaggcctaccagatgctcaac
aagttccgccagtccgaggggaagaaagccaagctgagcaggctgattagcgccttggag
gagaatgggctgatgggaattgcagagaggatgctggatattcagcctgcagagaggcag
tga
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