Polyodon spathula (Mississippi paddlefish): 121296231
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Entry
121296231 CDS
T07273
Name
(RefSeq) ataxin-1-like
KO
K23616
ataxin 1/1L
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
121296231
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Gene cluster
GFIT
Motif
Pfam:
AXH
Motif
Other DBs
NCBI-GeneID:
121296231
NCBI-ProteinID:
XP_041077507
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Position
21:6919289..6931047
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AA seq
791 aa
AA seq
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MKPAHERNQESLPPKKRDLPLNSSGGGDESTATRSSGSTGSDAPGSGVAGEWMRVQTGLQ
YSVESSESMAVPIDQYGMIYKVALPSGTYSPNSLHQVLNMGHLSPAYSMPSPLLQHPGIP
YPPMGYAQIPHSSLQFVGTPYAVPYGVPPGFVPSSLISPQAAIPQHHHVSHLVPYPSVIQ
EGVITPPPQPQSSAHAFTKVATAGGLSVVLASDHATQQQHIGAVAGHSTTEISPRGVPVY
YHHASSRAPPTAVAAAVYRDVLSHQDQGLVAASQHERGKVVNGGEEEQGGRELLQELLYS
GRNMQVLHVVASTAGGEGFVDGQHTTQRQPHHEERPSPSHRSTPDTDLEVQQVVGRLAFP
NQNVLGNRKEASIGPLNLSQGSHRSRETLPAAQGRGAVREETVLPGKTAFGGHAAVQGDP
RIQQQQQPQHQPSPQHHAVILANGQPVLVPLEQNQQFQQQQYPGLLSNITTTTTTAAAVP
KVSEPPARTGTPERVVVGVDVAAQRQGQPVSVQAPVTPQPSHFMKGAIIQLANGELKRVE
DLQTQDFVRSAEMSGGLKIDSSMVVDIRKSQQRPGLVALQFTVGEQQNKVAIDVPPEHPF
FVFGQGWSSCSPDRTVQLYGLSCHRLQAGDVCISLTLQQQTQTRTPTITANVNSAGVSQP
MGPPASQQLRAPGQFGADRTHREQEDEEEPMQVGGAGSGETALQTVRTFANQPRGQTSYY
LHTESHPQAEGEQSHTTSAAQRRWSAPGFQKYGTRSEESTQPSSSSSGSSRPSFIPQEVK
LSIEGRSNAGK
NT seq
2376 nt
NT seq
+upstream
nt +downstream
nt
atgaagcctgcccatgaacgcaaccaggagagcctccccccaaagaagcgggacttacca
ctgaatagcagcggagggggggacgagtcgacggccactcgcagttcgggctcaacaggg
agcgatgcccctggcagtggcgtggctggggaatggatgcgagtccagacaggactgcag
tacagcgtggagagctctgaaagcatggccgtacccatagaccagtatggcatgatctac
aaagtcgccctcccctcaggcacctactctccaaacagcctgcaccaggtcttgaacatg
ggacacctttctcctgcctacagtatgccctctcccctcctgcagcacccaggaatcccc
taccccccaatgggctatgcccagattccccactcctctctgcagtttgtaggcaccccc
tatgctgtcccatacggtgtgcctccaggctttgttcccagctccttaatctcaccccag
gctgctatcccccaacatcatcatgtttctcatctggttccctacccttcagttatccag
gagggagtcattacccctcctccacagcctcagtcctcagcccatgctttcaccaaagtg
gccacagcaggaggcctttccgtggtcctagcctctgatcatgccacacagcagcagcac
attggagcagttgcggggcactctacgactgaaatcagccccagaggagtgccagtctac
taccaccacgccagctctagggctccccctactgccgtggcagctgctgtttacagggac
gttttgagccatcaggaccaggggctggtggctgcttcccagcatgagagggggaaggtg
gtgaatggaggcgaggaggagcaagggggcagagagctgctgcaggaattgctgtactcc
ggcaggaacatgcaagtgctccacgtagtggccagcacagccgggggagagggctttgtg
gatgggcagcacaccactcagcggcagccccaccacgaggagaggccttcccccagccac
aggagcactcccgacacagacctggaggtgcagcaagtggtggggcgcctggcttttcca
aatcagaacgtcctgggaaatcgtaaagaagcctctatcggccctctgaatctgtcacag
ggctcccatcggagcagagagaccctgcccgcagcccagggtcgaggtgctgtcagagag
gagactgtgttgccaggcaagactgcgttcggtgggcatgctgcagttcagggcgaccca
agaatacaacagcagcagcaaccacaacaccagccctcgccacagcaccacgctgtgatc
ctggcgaatgggcagcctgtgttggtgccgctggagcagaaccagcaattccagcagcag
cagtatcctgggctattaagcaacataacaaccacaaccaccacagcagcggcagtccca
aaggtctccgaacctccagccagaacaggcaccccagagagggtggtggtaggagtggat
gttgcagcccagcggcaggggcagccagtatcggtccaggcgcccgtcacccctcaacct
tcccacttcatgaagggagccatcatccaattagccaacggggagctgaagcgagtggag
gacctgcagacccaagactttgtgcgcagcgctgagatgagcggtggtctcaagattgac
tccagcatggtggtggacatccgcaagagccagcagcggcctggtttggtggccctccag
ttcacagtcggggagcagcaaaacaaagtggccattgatgtcccccccgagcaccccttc
tttgtttttggccagggctggtcatcctgtagtcccgaccggacagtccaactgtatgga
ctttcctgccaccgattacaagcaggggatgtctgtatctcgctcaccttgcagcagcaa
acacaaacaaggacacccacaattactgctaatgtcaatagtgctggtgtctcccagccc
atgggacccccagcctcccagcaattgagggcccccggccagtttggagcagacaggact
cacagggagcaagaggatgaagaggaaccaatgcaggtcgggggagcgggatcaggggag
acagcactccagacggttaggacttttgcaaaccagcccagaggccagaccagctattat
ttgcacacagagagccatccccaggcagaaggggagcagtcgcacacaacaagtgcagct
cagcggcgttggtcggcgcccggtttccaaaaatacgggaccaggagcgaagaatcaacc
cagccttcctcctcatcctctggctcttccaggccttccttcatccctcaggaggtcaag
ttgtccattgagggacgctccaacgcggggaagtag
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