Polyodon spathula (Mississippi paddlefish): 121296246
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Entry
121296246 CDS
T07273
Name
(RefSeq) leucine-rich repeat and fibronectin type III domain-containing protein 1-like protein
KO
K16358
leucine-rich repeat and fibronectin type-III domain-containing protein 5
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
121296246
Domain-containing proteins not elsewhere classified [BR:
pspa04990
]
Fibronectin (FN) domain-containing proteins
Fibronectin type III domain-containing proteins
121296246
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Gene cluster
GFIT
Motif
Pfam:
LRR_8
LRR_5
Ig_3
LRR_4
LRR_1
I-set
Ig_2
LRR_9
BARF1_ig2
LRR_6
Motif
Other DBs
NCBI-GeneID:
121296246
NCBI-ProteinID:
XP_041077521
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All DBs
Position
21:23654824..23656245
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AA seq
473 aa
AA seq
DB search
MGHHLPLLLLLIMCKSLEAWNCTVSCNCTDYTSSCCGPQKTQHLPVIGHQNATELVLDSC
GSFPMDNNTLQNFSSLKELTVKRTSLLYLDSHAFHGLPMLQTLNLTEVNLSNAAMHQNAF
AGLPIRRLFLANNRLDQIQRGMFAGLMNLEHLDLSGNGLRSIEENAFANLVSLRFLNLNS
NHFVTITPYWFGVMFRNNSFPVVSLIGNTLTCECKYRGIALPEYLWFSRSVILTNSLCMV
KPAVKECSPPQVEEVYKEVTVRDLQPLTLSCPLSGFPRPRVSWILPSGLQLFNKSFPPFY
NEDGTLHVQLVQSKFAGLYACIGTNVEGTAVSLFKIVVSPTPKPTFITSQPVTFPTPQTP
TINRSLWVLLWTAIVFICIICFIILFCILRVACRYLKQRLRNDVSFNRFVDTPNILTLPE
NPQPIPHIEERHGHVHWSRENGDGTVPRVAEHSDGSYPRHQQTVTELEGRTQL
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgggtcatcatcttcctctactgcttctgctgatcatgtgtaaaagcctggaggcttgg
aattgcacagtaagctgtaactgcacagactacaccagctcctgctgtggacctcagaaa
actcaacatctcccagtaattggacatcaaaatgccactgaattagttttggattcctgt
ggaagctttcccatggataataacaccctgcagaacttcagctcgctgaaggaactgaca
gttaagagaaccagcctcctttaccttgactctcatgcattccacggccttcccatgttg
caaactttaaacctaacagaagtcaacttgagtaatgcagctatgcatcaaaacgccttt
gccggcctgccgataagaagattgttccttgcgaacaaccgacttgatcagatccaacgt
gggatgtttgctggtctgatgaatctggagcatcttgacctttccggcaatggcctcagg
tcgattgaggaaaatgcatttgcgaatttagtgagccttcgcttcctcaacctgaacagc
aaccactttgtcacaattacgccttactggtttggcgtaatgttcaggaataactccttt
cctgtggtgagtctcattggaaacacattgacctgtgagtgcaagtacagaggaatagcc
ctacctgaatacctgtggttcagcagatcagtgattttaaccaactccttatgtatggtg
aagcctgctgttaaagaatgcagcccaccccaggttgaagaggtctataaagaggtgact
gtgagggatctgcagcctctaactctatcttgcccactcagtgggttccctcgcccaagg
gtcagttggatacttcccagtggattacaattatttaacaaatcatttcctccattttat
aatgaggatggaacattgcatgtacaattagtgcaatccaagtttgctggactttacgct
tgcataggtacaaatgtggaagggacagctgttagcttgtttaaaattgtggtgtcaccc
actcccaagccaaccttcatcaccagccagcctgtcacctttcctactcctcagacccct
acaatcaacaggagtctgtgggtattgctgtggacagcaatagtctttatatgcatcatt
tgttttatcattctgttttgcatcttaagagtcgcctgcaggtacctaaagcagcgcctc
cgcaatgatgtttccttcaacaggtttgttgataccccaaatatcctaactcttccagag
aacccccagcccatccctcacatagaggagagacatggccatgtgcattggtcaagggag
aacggcgatggtaccgtcccaagagtggccgagcactctgatggaagctacccacgccat
caacagactgttacagaacttgaaggaagaactcagttataa
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