Polyodon spathula (Mississippi paddlefish): 121296268
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Entry
121296268 CDS
T07273
Name
(RefSeq) probable helicase with zinc finger domain
KO
K25168
helicase with zinc finger domain [EC:5.6.2.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121296268
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
Other 5'-3' decay factors
121296268
3'-5' decay
Other 3'-5' decay factors
121296268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
121296268
NCBI-ProteinID:
XP_041077543
LinkDB
All DBs
Position
21:complement(29908360..29930738)
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AA seq
843 aa
AA seq
DB search
MDVTALSALMEVLDQRQEAAERKRGEIYDREDWNQRSTPSTRRTPHGAPLARAQKMTMKD
DPEGYLVTFEQLATATSWPREYWASRLGSCLIGEAQAAYQAMTEDEISKKGFPSRTLKDR
QRNLEAVRKLRPANEVTVSVSSRTDSGVHALCNSAHVDIQRKSGKPPFTERLLVDALNYH
LKPEPISYCKMDGKSEHNSLHTPDRKAPDSKEKQVETVEAGHSRSPDPQASLNLPNARLH
RKENPVQRPLNFHLAPPNPPFPPHASRPPFRVHQQQQQAPQNHLPLQPGQVHQLTQQHSS
QLSPAFQAGHNPPFFNPLPHRGLHSPNLEAMAPEQPAMVPEEMNNAVRPVPQLNAPQPPP
AQPSRLNSFVEENSEAAALGEALDMQGVGTLEALSQQTRLHQWNEHNHFLQSNMAFPLHQ
QLAHPLAQQALRFPQQLIRGNWRLGNNAEEEPGPGYPRFPGLLREVPPSEQGELRDLPEM
PPPQSRLLQYRQVQQVQPRNPGALPSPSSNSNHTGHFPGPYGDTNRELEMINSQAFQQHQ
AQMFNNAFPMAAGHTTPPPVKYLLPEAQWPHPGLQQNHILGQGFHYGMQQLAHRQEQVHL
MQMHQQQQQQKQQQQQHQQQAINQESFHPLSPQTVSAASLHNIEEYEPRGPGRPLYQRRI
SSSSVQAFPEDSGAAPGGPGQCKELPDHRSNLSYNYPSPELWASANSSVPFQNIPCNGAS
RVVLHRDLLASKVVCSAEEHMKAEGVQQLSSSFNYTTLQHLGQFPPLMPSKQPSPEPCSS
ASGLQNPGMGKPPTMSYASALRAPPKPRPLPEQTKKSSDPLALLQELSIGSSTGSNGYYS
YFK
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcactgcactctccgcgctgatggaagtgctggatcagagacaggaggctgcg
gagagaaagagaggagagatatacgatcgagaagattggaatcagagaagcaccccaagt
accagaaggacccctcatggtgcccccttagcgcgggcgcagaaaatgacaatgaaagat
gacccggagggatacctggtcacctttgaacagctggctaccgccacttcatggcctcgg
gaatactgggctagtcggctgggctcctgcctgatcggggaagcccaagcagcctatcag
gccatgaccgaggatgagatttcaaagaagggatttccttcccggacactaaaagacagg
cagcggaatttggaagctgtgcggaagctgaggccagccaatgaggtcactgtgtctgta
tccagccggacggacagcggggtgcacgcgctctgtaactctgcccatgtggacatccag
agaaagagtggcaagcctcccttcacagagaggcttcttgttgatgctttaaattaccac
ctgaagcctgaacccatcagttattgtaaaatggatggaaaatctgagcataacagtctg
cacaccccagacaggaaagcccctgattccaaagagaaacaggtggaaaccgtggaggct
ggacatagcagaagccctgacccccaagcaagcctaaatttaccaaatgccagactccac
aggaaagaaaacccagtccagaggccgcttaacttccacctggctccccctaacccccct
ttcccccctcacgcctcccggcccccgttcagagtccaccagcagcagcagcaggcccct
cagaatcacttgcccctgcaacctggccaggtgcaccaactgacccagcagcattcatcc
cagctatctccagccttccaggccggtcacaacccccccttcttcaaccccctccctcac
cggggcttgcactccccgaacctcgaggccatggctccggagcagcccgccatggtgccg
gaggagatgaataatgcggtgaggcccgttccacagctcaacgcaccacagccgccgcca
gctcagcccagccggctcaacagctttgtggaagaaaactctgaggcggcagccctggga
gaagcgctagacatgcagggggtcggcacgctggaagctctaagtcagcagacgagactg
caccagtggaatgaacacaatcactttctgcagagcaacatggctttccctctgcatcag
cagctggctcatcccctagcccagcaggccctgcgcttcccccagcagctcatcagaggc
aactggaggctgggcaacaatgcagaggaggagcctggaccaggataccccaggttcccc
ggtctgctcagagaggtgcctccttcagagcagggtgagctacgggacctgccggagatg
ccccctccccagtctcgcttgctgcagtacaggcaggtccagcaggtccagccccgcaac
cctggagccctcccctccccttcgtccaactccaatcacaccggccacttcccaggcccc
tacggagacaccaaccgggagcttgagatgatcaacagccaggcttttcagcagcaccaa
gcccagatgttcaacaatgccttccccatggcagccggacacaccacccctcctccagtg
aagtacctgctccctgaggctcagtggccgcaccctggcctgcagcagaaccacattctg
gggcagggctttcactatggcatgcagcagttagcccacagacaggagcaggtccacctg
atgcagatgcaccagcagcagcagcagcagaagcagcagcagcagcagcaccaacagcag
gccatcaatcaggaatcatttcacccactctcgccccaaacggtgtctgctgcttcactt
cacaacatagaagagtatgaacctagaggaccaggcaggccactgtaccaaagaaggatc
tcttctagttctgtgcaggctttccctgaagattcaggcgctgctccaggtggtcccggt
cagtgtaaggagcttccggaccatcgtagcaatctctcatacaactacccatccccagag
ctgtgggccagcgccaactcctctgtgccatttcagaacattccatgcaatggagccagc
agagtagttctgcacagggaccttttagcttcaaaggtagtctgttcagcagaggagcac
atgaaggctgaaggtgtgcagcagctgtcgagttcgttcaattacaccacgctgcagcac
ctcggccagttccccccgctcatgcccagcaagcagccgagtcctgaaccgtgcagcagc
gccagcgggctgcagaaccctggcatgggcaaaccccccaccatgtcgtatgctagcgcc
ctgcgggcaccccccaaaccaagacccttgcccgagcagacgaaaaagagcagtgatccc
ctggccttgttacaggagctcagcataggcagctcaacaggtagcaatggatattattct
tacttcaaataa
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