Polyodon spathula (Mississippi paddlefish): 121296300
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Entry
121296300 CDS
T07273
Name
(RefSeq) mitochondrial Rho GTPase 1 isoform X1
KO
K07870
mitochondrial Rho GTPase 1 [EC:3.6.5.-]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04137
Mitophagy - animal
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121296300
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pspa03029
]
121296300
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pspa04031
]
121296300
Mitochondrial biogenesis [BR:
pspa03029
]
Mitochondrial protein import machinery
Endoplasmic reticulum membrane and cytosol
Other ER-memrane and cytosol factors
121296300
Mitochondrial quality control factors
Mitochondrial dynamics
Morphogenesis factors
121296300
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rho Family
Miro
121296300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF_assoc_2
EF_assoc_1
Ras
Roc
SRPRB
Arf
RsgA_GTPase
EF-hand_7
MMR_HSR1
EF-hand_6
EF-hand_1
AAA_22
AAA
AAA_16
ABC_tran
PduV-EutP
AAA_5
EF-hand_8
nSTAND1
Rad4
Motif
Other DBs
NCBI-GeneID:
121296300
NCBI-ProteinID:
XP_041077620
LinkDB
All DBs
Position
21:29388532..29407478
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AA seq
709 aa
AA seq
DB search
MRKDVRILLVGEPRVGKTSLIMSLVSEEFPDEVPPRAEEITIPADVTPERVPTHIVDYSE
AEQTDEQLYQEISKANVICIVYAVNNKNSIEKVTSQWIPLINDRTDKDSRVPLILVGNKS
DLVEHSSMETILPIMNQYTEIETCVECSAKNLKNISELFYYAQKAVLHPTGPLYCPEEKE
MKPACIKALTRIFKITDQDNDGILNDAELNFFQRTCFNTPLAPQALEDVKNVVRKNVSDG
VFDNGLTLKGFLFLHTLFIQRGRHETTWTVLRRFGYGDDLELTQDYLFPLLKIPPDCTTE
LNHNAYLFLQSVFDKHDLDRDCGLSPDELKDLFKVFPYMPWGPDVHNTVCTNDRGWITYQ
GYLSQWTLTTYLDVQRCLEYMGYLGYSIISEQVSQTAAVTVTRDKKIDLQKKQTQRNVFR
CNVIGMKGCGKSALLQAFLGRNLMRQRQIREDHKSFYAISTTYVYGQEKYLLLHELLTDS
EFLSDSEISCDVVCLVYDSSNPSSFEFCARIFKQHFMNSKTPCMIVAAKSDLHEVKQDCS
PSPLDFCRKHKMPPPQPFTCNTVDVPSKDIYIKLTTMAMYPHASLRCMCTCNRCTFCICH
NFLNSDLLHSVKTKLYTAVLNRLSPDVDEFGAMLLADEESSLGQQVHAVSYVEDSIFMES
SRDARLKTEDRHVMQADLKSSTFWLRASVGATMFAVLGFAMYRALLKQR
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaagacgtgaggatactgcttgtaggagaacccagagttggtaagacctcgttg
attatgtcgctggtcagcgaggagttcccagacgaggtccctccccgggctgaagagatc
acaatccctgctgatgtcactccagaaagggtccctactcatatagttgactattcagaa
gcagaacaaacagacgaacagctttatcaggaaatatcaaaggccaatgttatatgcata
gtgtatgcagtcaacaataaaaattccattgagaaggtcactagtcagtggattccttta
atcaatgatagaacagacaaggatagcagagtgcctctgatattggttgggaacaagtca
gacctggtggagcacagcagcatggaaaccatccttcccattatgaaccagtacactgag
atcgagacttgtgttgagtgttcagcaaaaaacttgaagaatatctctgagctgttctat
tacgcacagaaggctgttctgcatcctacgggccccctgtactgccccgaggaaaaagag
atgaagcctgcttgcattaaagccctgacccgcatcttcaagattacagaccaggacaat
gacgggattcttaacgatgccgaactcaacttctttcagaggacatgctttaacaccccc
ctggctcctcaggccttggaggatgtgaagaacgtggtccggaagaacgtgagtgatggg
gtgtttgataatggactgacactgaaaggctttctgtttctccacacgctgtttatccag
cgagggcggcacgagaccacgtggacagtgctgcgtcgatttggatacggtgatgatctg
gagctcactcaggactacctgttccctctgttaaaaatccccccagattgtacaacagag
ttaaaccacaatgcatatctcttccttcagagtgttttcgacaaacatgatttggacagg
gactgtggtttgtcccccgatgaactcaaggatctattcaaagtctttccctatatgccc
tggggtccagatgtccataacacagtctgcaccaatgacagaggctggatcacctaccag
ggatacctgtctcagtggacgttaacaacgtatctagatgtgcagcgctgcctggagtac
atgggctacctggggtactccattatatcagagcaggtgtcgcagactgcggctgttact
gtgacgagagacaagaagattgacctccagaagaagcagactcaaaggaacgttttcagg
tgtaacgtcatcgggatgaaaggctgtgggaagagtgccttactgcaagccttcctgggg
cgcaacctgatgagacagaggcagatcagagaggatcacaaatccttctacgcaatcagc
accacctatgtgtatggccaggagaaatacttactgttacatgaactgctcacagattca
gaatttctttccgattctgagatttcctgcgatgttgtctgtttggtgtatgactccagc
aaccccagttcatttgaattttgcgcaaggatattcaagcaacacttcatgaacagcaag
actccgtgcatgatcgtcgctgccaagtccgatctgcatgaggtgaagcaggactgcagc
ccctcccccttggacttctgcaggaaacacaaaatgcctcctccccagcccttcacctgc
aacactgtggatgtcccaagcaaagacatctacatcaaactgaccaccatggcaatgtac
ccccacgccagcctacgctgcatgtgcacctgcaacaggtgcaccttctgcatctgtcac
aacttcctcaactcagacttgctgcattctgtaaagaccaaactctacactgccgttctc
aacaggttgagccccgatgtagatgaatttggggctatgctgttggctgacgaggagagc
agtctcgggcaacaggtgcacgctgtcagctatgtagaagattccatcttcatggagtcg
tctcgagacgcccgtttaaagaccgaagacagacatgtgatgcaagcagatctgaagagc
tctacgttctggctgcgggccagtgtgggagccaccatgttcgctgtcctgggattcgcc
atgtacagagcgcttctgaagcagcggtga
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