Polyodon spathula (Mississippi paddlefish): 121296304
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Entry
121296304 CDS
T07273
Name
(RefSeq) ankyrin repeat domain-containing protein 11-like isoform X1
KO
K21436
ankyrin repeat domain-containing protein 11/12
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121296304
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Other HDAC associated proteins
121296304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_4
Ank_3
ANK_LRRK2
Motif
Other DBs
NCBI-GeneID:
121296304
NCBI-ProteinID:
XP_041077629
LinkDB
All DBs
Position
21:complement(6716487..6806675)
Genome browser
AA seq
2888 aa
AA seq
DB search
MPKGGGSKTPQSEDFPPNTDMVEKQTGKKDKDKVSLNKTPKLDRNDGGKEMKEKAPKRKL
PFTVGANGDQKDSDSDSDPGLSSEAWDHQCAAASLSTHRPHSEKQGPERKRIKKEATNTR
KSGLAFGVGMPGIRAGYPLSERQQVALLMQMTAEESINSPDTTPKHPSQSNMGQKGTPNS
ASKTKDKVNKRNERGETRLHRAAIRGEARRVKELINEGADVNVKDFAGWTALHEACNRGY
YDVAKQLLAAGAEVNTKGLDDDTPLHDASSNGHFKVVKLLLRYGGNPHQSNRRGETPLKV
ANSPTMVNLLLGKGTYTSSEESSSESSEEEDAPSFAPSSSVDGNNTDSEFEKGLKLKGKN
QDPAKSMATPVKDEYEFDEDDEEERVPPVDDKHLLKKEFRKAAAMKANSLISIPKIEVKT
YSKSNSLTPKKTARRILSDTNSSDEDDRTLCFSPTPMAKQQPTSFKNRESSATSSKQQKE
KSKVKKKRKKETKNSSSANKEVRFGKLNDKFCTSESESEDLESEDDKGSVQSSVCVKDSS
ALSLKESAVFSSLSASSSSSHGSLVAQKHTPSLAEQHPKQWRTDGWKTISSPAWSEVSSL
SESGRTRLTSESDYSSEDSSLESVKHVKKKQQENKKKNNTHNNSEKKSSSDFYKNSSTEG
AVPKLDKEGKVVKKHKVKHKHKSKEKDKAPSLVLNQDMKEKFVKSFSFDYEDTRQKPLIS
EAESPVENKVKSSKHDKDHFKKEEKLFKGKSEEKDWTSGKETGKAAKEEKSSKKVSSKDK
SNKEDKDKTFKIEKEKNTKDKEKPKEEKQKTYKEEKKKKSKDKSSKAEKNEQKEEKYPKF
EKEKTIKEEKEKSKKEKTFKEDTDYEDYDIKNRFLESEDAKLSVSDDPHDRWLSDLSSDS
SLYGDDSWDTPIKEYKEYKANNTVKLIVETVKEENRDRKKESKVKEKKEHSEKRNEKETT
TKKKDKEFLEKTWDKKPVDKQKSVSSYPSEKEKKRKDSAESIKEKKDCIDCSKERKDSYD
LTKERKESKTKPDDSLKEEYGNESFLYKSETEFVSKQFESRERHYSGKEKEKKGEGAEKE
KKEKLKSDKHKEKTKEKERNFLESEKEKTEKNSIEKPPKEKDTDRSSKDKKEGVKDKHKD
SHVKDKERKMSLEQSKDKKEKASQDKHADKEKDFQEIKKEEKKSEKGREKSWFSIADIFT
DESEDEVDYSVGGSKFSDSVARSEIQRADLVPERDEVELFQTDKHRKYSADGKQHSSEKQ
KEKEFKEKKKDKVSFDSGKEKKEKNSLEKHKEKKDKDSGEGKHKDRKERISTDSNQDKRN
KQKILDKRHQSEEKPKSKHKDKPEKDHLKDRKPSKGNMENEKSLLEKLEEEALNDYKDDS
NDKISEISSDSFTDRGHEPLLSSFYDSSSISLPDLSEERRDSLSISYPQDKLKEKERHRH
SSSSSKKSHEKEKDKVKKVEKRDKSEEIRETYGRRESLPFEKESMPLEADPYSFPYGVNP
EAENDLDKTIEFEKEMSKKTEKEKAFSNLVNSEKIKDKEKKKKDKHKEKTKEEKHKHIDS
SGSFKHSKEDQKLGLKDMPQVTGLREKSKDETAKCDAKLRERSKDNLDKDIKSDSVKTKA
KEENDKVNQSRDGTRKENRPRERLLVDGNLVMTSFERMLSQKDQEIEERHKRHKERMKQM
EKMRHRSGDQKLKDKTKTSEDLRKRSQDLTSKKSSSLETVLKDKKPKDLGIPAQIMSPDR
KTQSVGGQDSKDWLVGHQLKENLPASPRPDQSRPTGVPTPASVISCPSFEEVMQTPRTPS
CSAEDYTELMFDNIDSQNSSAMTMSMNACSPSFFDRYSNTPSSLQETPCPTPTKNLPTAS
LYRSVSVDVRRASEEEFKMDSDKFFRQQSVPVTSEYEPSLPQLPEEKPLASATPSVDKVD
CLSPPCFSPNFRMSSPRLEPAQPAMDGSSAATTDNIENFPESVYNNYLTKPSSPLHRPEP
KPQEHCIDIAAPPTPAPVALLELDDFSELQPLPLPLSSKPILVPSEPVNSDDFLPPVVEE
FEKRGDEEEEENYDDDEEEELLQLQEEDEEDENTTFSASETIKKDWVESPVRRSSEPPPL
QSPSPLPSPPPPPPPVSLVENSSDHWSISSLLLKSPLRTFPEPPPSTKITSFTLPDVHLQ
HHLLTSLPCIPHVSPPYPVSPISYPVPLPEPELETHKDAVEETPSQSEPAVATSEPEPNF
MPSPARLDSFFTDCKPLPEEHRGMAPEPACLPTEAQPDTLPTLKSKYIEDSNIASLECQE
DPVVPWSDPFSNAVEDLDLGPFSLPELPLQDKEIQEPVIADSELAEFKPVPPPPPVSAAE
EDNEGSDIMEVDLPGLSEEKLSPPTVVLLLEPLQPPQLPSEEHKPEPELQKVPEDYTTDH
AVAEEKAALDVRKEQEESVQAPTAQNEGADTNNNHETEFPDCLVEEPLAVAALPSCGTEG
LLGQANSAQPLAAITVQPSPSQTVADQTGVPQSNAVQITEAHEPVAKTTLIPTTEAPKPA
KVEEIPQRITRNRAQMLANQNKQNNNTTTLTTASTPAINIITSPAEKEKESVSTTTVSAA
ALTHPAPVSKTKGRPVEEEDSQAQHPRKRKFPKSNQQQQVQAQLVNTTMHQTREVIQQTL
AAIVNAIKLDDIEPYHSDRSNPYFEYLQIRKKIEEKRKILCYITPQAPQCYADYVTYTGS
YLLDGKPLSRLHIPVIAPPPSLSEPLKELFRQQEAVRGKLRLQHSIEREKLIVSCEQEIL
RVHCRAARTIANQAVPFSACTMLLDLEVYNMPSENQGDENKSVRDRFNARQFISWLQDVD
DKYDRMKTCLLMRQQHEAAALNAVQRMEWQLKVQELDPAVHKSLCVNEVPSFYVPMVDVN
DDFVLLPA
NT seq
8667 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagggtgggggttctaaaacaccccagtcagaggatttcccaccgaacaccgat
atggtggagaagcaaactgggaaaaaggataaagataaagtctctttaaacaagactcca
aagttggaccgaaatgatggaggaaaagagatgaaagagaaagctccaaaaagaaaacta
ccatttactgttggagcaaatggagaccagaaagattccgattcagattctgaccccggc
ctgtcatcggaggcttgggatcaccagtgtgctgccgcctcactctctactcacaggcca
cactcagagaaacagggtccagaacggaagcggattaagaaagaagccaccaacaccagg
aagtccgggctggcattcggtgtgggaatgccaggaatccgggccggttaccctctctcc
gagcgacagcaggtcgctttgctcatgcagatgactgctgaggagtccattaacagtcca
gacacaacaccaaagcacccgtcgcagtctaatatgggtcagaagggaacgccaaactct
gcttcgaaaaccaaagataaagtgaataaacggaacgagcgaggggagacacgattgcac
cgcgctgccatccggggagaggcacgcagagtaaaggagcttattaacgagggagcagac
gtgaatgtaaaagactttgcaggctggacagccttgcatgaggcgtgcaacaggggttat
tacgatgtggccaagcagctgctggcagccggagcagaggtcaacacgaaggggctggac
gacgacaccccgttacacgatgcctccagcaatgggcacttcaaggttgtaaagttgctg
ttgcggtatggagggaacccccatcaaagtaacagaaggggtgaaacgccgttaaaagta
gctaactcccctacaatggtgaatctgttacttgggaaaggcacctatacctcaagtgag
gagagctcttcagaatcttcagaagaggaggatgctccttcgtttgctccctccagctct
gttgacggcaataacacggactcagagttcgaaaagggcttaaagctgaaagggaaaaac
caggaccctgcgaaatcgatggctaccccagtaaaggatgaatatgagtttgacgaggat
gacgaggaggagagagtcccacctgtcgacgataagcaccttctcaaaaaggagttccgc
aaggcagccgccatgaaagccaacagcttaatttctatccccaaaattgaggtcaaaaca
tattccaaaagcaactcgctcacaccaaagaagacagcacgccggattctgtccgacaca
aacagctcagatgaggacgacaggactttgtgtttctcccccacaccaatggcgaagcag
cagccgacatccttcaagaatcgggaatcctcggccacgtcctccaagcagcagaaagaa
aaaagcaaagtaaaaaagaagagaaagaaggaaacaaaaaacagcagtagtgccaacaag
gaggtgcggtttggcaaattgaatgacaagttctgcacatcagaatcggaaagtgaggat
ttggagagcgaggacgacaagggctcggttcagagctctgtctgtgttaaggactcttct
gctttgagccttaaagaatcggctgttttcagctctctttccgcctcctcttcctcctcc
catgggagtttggtcgcccaaaagcacacgccatcactggcggagcagcatcccaagcaa
tggcggactgatggctggaagaccatctcctcacctgcttggtctgaagtcagctccctt
tcagagtcgggcaggacccggctgacaagtgaatcagattactcttccgaggactcaagt
ctggagtcagtgaagcatgtgaagaaaaaacaacaggagaacaagaagaagaacaatact
cacaacaactcagagaaaaagagctcctctgatttctacaagaactcaagcacagaaggt
gctgtccccaagttggacaaggaaggaaaagtggtaaaaaagcataaagtaaagcataaa
cacaaaagcaaagagaaggacaaagctcctagcctggtccttaaccaagacatgaaagag
aaatttgtcaaaagcttttcttttgattacgaggatacgagacaaaagccgttgatctct
gaggcagaatctcctgtggaaaataaagtcaagagttccaaacatgacaaagaccacttt
aaaaaggaagagaaattgttcaagggtaagtcggaggaaaaagactggacctcagggaaa
gaaacaggaaaagctgctaaagaggaaaaatcttcaaagaaagtgtcctccaaagacaaa
tccaacaaggaggacaaagacaaaacattcaaaatagaaaaagaaaaaaacacgaaagac
aaggaaaagcccaaggaagagaagcaaaagacgtacaaagaggagaagaagaaaaagtca
aaggataaatcatccaaagcagaaaagaacgagcaaaaagaagaaaaatatcccaaattc
gaaaaggagaagaccataaaagaagagaaagaaaaatcaaaaaaggaaaaaacattcaag
gaagataccgattacgaagactatgacatcaagaatcgttttctggaaagcgaggatgcc
aaattaagtgtatccgatgacccccatgacaggtggctttcagacctttcttcagattca
tctctctatggcgatgatagttgggacactccgataaaagaatacaaggaatacaaagct
aacaacaccgtcaaactgattgttgagactgtaaaagaggaaaacagagaccggaaaaag
gaaagcaaagtaaaagaaaagaaggaacacagtgaaaaacggaatgaaaaagagaccaca
accaagaagaaagacaaggaatttttagagaagacttgggataagaagcctgtagataaa
cagaagtctgtctccagctacccatcagaaaaggaaaaaaagaggaaagactctgctgaa
agtatcaaggagaaaaaagattgcattgattgcagcaaggaaagaaaagactcctatgac
ttaacaaaagaaagaaaagaatctaaaactaaacccgatgattcattaaaagaggagtat
ggtaatgaaagttttttatataaatctgaaactgagtttgtcagcaaacagtttgagtca
agggagaggcactactctggaaaagaaaaggagaagaaaggagagggtgcagaaaaggaa
aagaaagaaaagttgaaatctgacaaacacaaagagaaaactaaagagaaagagaggaac
ttcttggaatcagaaaaagagaagacagaaaaaaattccattgagaagccacccaaggag
aaagatacggacagaagttcaaaggacaagaaggagggcgtgaaagacaaacacaaagac
tcccatgtcaaagacaaagagagaaaaatgtctttagaacaaagcaaagataaaaaagag
aaagcatcccaagacaagcatgcagataaggagaaggattttcaagagataaaaaaggaa
gaaaagaaatctgaaaaggggagggaaaagagctggttcagtattgccgacatctttacc
gatgagagtgaggatgaggttgattacagtgtggggggctcaaaattcagcgactcagtt
gcaagatctgaaatccaacgggcagatcttgtaccagaacgagatgaggtagagctattc
caaacagacaaacaccggaagtactctgctgatggaaagcagcactcatctgaaaaacag
aaggagaaagaatttaaagaaaagaagaaagacaaggtgtcatttgacagtgggaaggag
aaaaaagaaaaaaactctttagaaaaacacaaagaaaaaaaggacaaagactctggtgaa
ggcaagcacaaggaccgtaaagagaggatatcaacagattcaaaccaggacaagagaaac
aaacagaagattcttgacaagaggcaccagagtgaggagaagcccaagagcaagcataaa
gacaagccagagaaagaccacctgaaagacaggaagccatccaaagggaacatggaaaat
gaaaagtctctcctggagaagctggaagaggaagctctgaacgactacaaggatgactca
aatgacaaaattagtgagatctcttctgacagcttcacagacagaggccatgagccgtta
ctaagcagcttctacgactcctcgagcatcagcctgcctgacctctctgaagagagaagg
gactcactctctatttcctaccctcaagacaagctcaaagagaaggagagacataggcat
tcctcctcctcttctaagaaaagccacgagaaagaaaaagacaaagtcaaaaaggtagaa
aaacgggataagtcagaggagatcagggagacctatggccggagggagagcttgccattt
gaaaaagagtccatgccattggaagctgatccatacagtttcccttatggggtgaatcca
gaagctgagaatgatctggacaagaccattgaatttgagaaggagatgtctaaaaagaca
gaaaaagaaaaagctttcagtaacttggtcaacagtgagaagatcaaggataaagagaag
aagaagaaagacaagcataaggagaagacaaaagaagaaaaacacaagcatatagatagc
tctggctctttcaaacactcaaaggaagatcagaaactgggcctgaaggacatgcctcaa
gtcactggcttaagggaaaagtcaaaagatgagacagctaaatgtgatgctaaactcaga
gagaggagcaaagacaacttggacaaagacattaagtctgattctgtgaagacaaaagca
aaagaggaaaatgacaaagtcaaccagtctagagatgggactcggaaagaaaacaggcca
agggaaaggcttttagttgatgggaacctcgtgatgaccagctttgaaaggatgctgagt
cagaaagatcaggaaattgaggaacgccacaaacggcacaaggagcggatgaaacagatg
gagaagatgagacacaggtcaggggatcaaaagcttaaagacaaaactaaaacgagcgaa
gacctgcgtaagagaagccaagatctgacttccaaaaagtcaagctcattagaaactgtg
ctgaaggacaagaaacccaaagatctgggaattccagctcaaattatgtcaccggacaga
aagacgcaatctgtgggtggccaagattcaaaagactggctggtggggcatcagttgaaa
gagaacttgccagcttcaccaaggccagatcaaagtcgaccaactggagttccaactcca
gcatctgtgatttcttgtccaagttttgaagaagtgatgcagacaccacgcacaccatct
tgtagtgcagaggactacacagaactcatgtttgacaacattgattctcagaactcatct
gctatgacaatgtccatgaatgcctgttctccatccttctttgatcgatattctaacacc
cccagcagcttacaggaaactccttgccctactcccacaaagaacctaccgacagctagc
ctttaccgatcagtgtcagttgatgtcaggagggcctcggaagaggaatttaaaatggat
tctgacaagttcttccggcaacaaagtgtaccagtaacatctgagtatgaaccttcactt
ccgcagctgccagaagagaaacctctggcttctgctacaccttcagtggacaaggttgac
tgcctgtcccctccttgtttttctcctaatttcagaatgtcctcaccaaggttggaacca
gctcagcctgcaatggatggctcctctgctgctaccacagacaatattgaaaactttcct
gagagtgtctataataattatttaacaaaaccttcaagtccgttgcacagacctgaaccc
aaaccccaggaacattgcattgatattgctgcacctcctactcctgcccctgttgctctt
ctagaactagatgatttctctgaactgcagccgctgccattgcctctgagcagcaaaccc
attctggtaccttcagagcctgtgaacagcgatgacttccttccaccagttgtagaagag
tttgaaaaaaggggggatgaggaggaggaggagaattatgatgatgatgaagaagaagaa
ctactacaactacaagaggaggatgaggaagatgaaaacacaactttttctgcttctgag
acaatcaaaaaggactgggtggaatctcctgtaaggaggagttctgagcctccacctctt
caatctccttctcctcttccttctcctcctcctcctcctcctcctgtgagtctggtagaa
aactcctctgatcactggagcatcagctcattgctcctgaaatctcctctcagaaccttc
cctgaaccacctccctctactaagatcacctcttttacgctgccagatgtccatttacag
caccacctcctcacatctctgccctgcattcctcatgtttccccaccctatcctgtgtct
cctatctcttaccctgtgccgcttcccgagcctgagcttgaaactcacaaagatgcagtg
gaagagacccccagtcaatcggagcccgctgtggcaacaagcgagcctgagcctaatttt
atgccgtcccctgccagactggattccttctttacagactgtaagccccttcctgaggag
catagaggaatggcaccagagcctgcatgcttaccaacagaggctcaaccagataccctt
cccactttgaaaagtaaatacattgaggacagtaacatagcatctctcgaatgccaggag
gatccggtggtgccatggtcggaccctttctcaaatgctgtcgaagatctagacctggga
cctttttctctccctgagttacctttgcaagataaggaaatccaagaacctgttattgca
gattctgagctggctgaatttaaaccagttcctcctcctccccctgtgtctgcagctgag
gaagacaatgaggggtctgatataatggaggttgatttgccaggtctgtctgaggaaaag
cttagccctccaactgttgtgctgctacttgaacccctacaacctccacaactcccttct
gaagagcataagccagaaccagaactacagaaagttccagaggattacaccaccgatcat
gctgttgcagaagaaaaggctgctttggatgtgagaaaggaacaggaggaaagtgtgcag
gctcccactgcccagaacgaaggagctgacaccaacaataaccatgaaactgaatttcca
gactgtttagtagaggaacccttggctgttgcagctctcccatcctgtggtactgaaggc
ctcctaggccaggcaaatagtgcccagcctcttgcagcaatcacagttcaacccagccca
agtcaaacagttgcagaccaaactggggttccccaatctaatgctgtacagattacagaa
gcccatgaacctgtggctaaaacaactttaatccccaccacagaggctcctaagccagca
aaggtggaggagattcctcagaggatcaccaggaatcgtgctcagatgttggctaaccag
aataagcagaacaataataccaccacattaacgactgcttcaacccctgccattaacatc
atcacctctcctgctgaaaaggagaaggaatctgtcagcaccaccacagtgtctgctgca
gccctgacacatccagcaccagtcagcaagaccaaaggacggcctgtggaggaagaggat
tcacaggcacagcacccgcgcaagaggaagttccccaagtccaaccagcagcagcaagtc
caagcgcagctggtcaacaccacaatgcaccagacacgggaggtgatccagcagaccttg
gcagccattgtcaacgctatcaaactggacgacattgagccttaccatagtgaccgctcc
aacccttactttgagtacctgcagattcggaagaagatcgaggagaaacggaagatactc
tgctacattacaccgcaggcaccccagtgctatgcagactacgttacctacacaggttcc
tatctgttggatggcaagcctctcagcaggcttcatattccagtgatcgctccaccccca
tctttgtcagagccactgaaggagctgttcaggcagcaagaggctgtacgaggaaagctg
cggcttcaacacagcattgagcgggaaaagctaatagtgtcttgtgagcaggagatccta
agagtacactgcagggcagccagaacaatagcaaaccaggctgtcccgttcagtgcctgt
accatgctgctggatttggaggtctataacatgccttcagagaatcagggtgatgaaaac
aagtctgtgagagaccgatttaatgccaggcagttcatatcgtggcttcaggatgttgat
gacaagtacgacagaatgaagacctgcctattaatgcgacagcaacacgaagcagcagca
ctgaacgcagtgcagaggatggagtggcaactcaaagtgcaggagctggatcccgctgta
cacaaatcactttgcgtcaatgaggtcccttccttttatgtgccaatggtcgacgtcaat
gatgactttgtgctgttgccagcgtga
DBGET
integrated database retrieval system
