Polyodon spathula (Mississippi paddlefish): 121296306
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Entry
121296306 CDS
T07273
Name
(RefSeq) B-cadherin-like isoform X1
KO
K05689
cadherin 1, type 1, E-cadherin
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04371
Apelin signaling pathway
pspa04514
Cell adhesion molecules
pspa04520
Adherens junction
pspa05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04371 Apelin signaling pathway
121296306
09133 Signaling molecules and interaction
04514 Cell adhesion molecules
121296306
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121296306
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
121296306
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pspa03036
]
121296306
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121296306
04090 CD molecules [BR:
pspa04090
]
121296306
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
121296306
Cell adhesion molecules [BR:
pspa04515
]
Cadherins
Major cadherins
121296306
CD molecules [BR:
pspa04090
]
Proteins
121296306
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
CADH_Y-type_LIR
Cadherin_pro
Cadherin_4
TM_ErbB1
Motif
Other DBs
NCBI-GeneID:
121296306
NCBI-ProteinID:
XP_041077635
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All DBs
Position
21:6482780..6497135
Genome browser
AA seq
885 aa
AA seq
DB search
MGSNSLGVILVLVQIWIGGFCEETAQCRPGFSSDSFVFSVNRGELERGRVIGKVNFDDCT
GRKVVLHTSDDSRFDVDTDGTIRLKRRVKLHDGHKSFAVHAWDTKGKRTSTRVTVENEKR
RRHSHHRDHHHDGKQNSTNVQSSNQVLVFPQSSTGLKRQKRDWVIPPISVSENERGPFPK
FVVQIKSNRVKEIAVFYSITGPGADAPPEGLFTITRTSGELYVTQPLDRESQSQYILMSH
AVDINGATVEDPMEIIIKVTDQNDNRPEFTMNTFLGRISEGSPVGAVVMKVTATDKDDPT
MDNGIIGYSILNQEPQEPHSPMFSINKSGTISVVATGLDREKVPEYKLIIQAADLEGRGL
STTATAVITVTDQNDHAPQFKTAQETVTVPENEVGILVTRLAVTDLDVPHTPAWNAKYTI
VKGNDGNVFNISTEQGSNDGILKTAKGLDYETRRQYTLFVTVENEEPFTSTLPTATATIT
VNVEDVNEAPIFNPVVKRVVVEENMPIGNTVTVYTATDPDKEMKQTVTYRMGNDPAGWLE
INNNGVIKAKQLMDRESPFVKNNTYTAMFLALDNASPPATGTGTLVVELTDVNDNGPEVV
EREVRFCNKGTIPQILNVVDRDTSVYAGPFKVQVLRDEEKNWTATMNDKGEHIIVTMAKE
LKQNDYLIILRVFDTDNKYQDSSIKAMVCDCKGDEFSCQDKISDAGFGLPAILGILGAIL
ALLILLLVLLLLLRRRKTIKKEPLLPEDDIRDNVFYYDEEGGGEEDQEYDLSQLHRGLDA
RPDVFRNDELPTGNAVPQFPYRPRPANPEDIGNFIDDNLKAADNDPTAPPYDSLLVFDYE
GGGSEAGSVSSLNSSSSGDDQDYDCLNEWGPRFKKLADMYGGGED
NT seq
2658 nt
NT seq
+upstream
nt +downstream
nt
atggggagtaatagtttgggagtaatacttgtcctagtccagatttggattggaggattt
tgtgaagaaactgcacaatgtcggcctggattcagttcagacagttttgtcttcagtgtc
aacagaggagagctagagagaggcagagtgattggtaaagtgaattttgatgactgtact
ggacgcaaggtagtccttcatacctcggatgattcccggtttgatgtggatacagatgga
accatcagactgaagagaagggtgaaactgcatgatgggcacaagagctttgctgtccat
gcctgggatactaaaggcaagagaaccagcaccagagtcacagtggaaaatgaaaagaga
agacggcactcccaccatagagaccatcaccacgatggaaagcagaactctacaaatgtt
cagagcagcaaccaggtcctggtatttccacaatcttctactggcttgaagagacaaaag
agagactgggtgattccacctatcagtgtttctgaaaatgaacggggcccattccccaaa
tttgtggttcagataaagtccaatagagtcaaggaaattgcagttttctacagcataaca
gggcctggagcagatgcacccccagaagggcttttcacaattacaaggactagtggagaa
ttgtatgtgacccagcccttggatcgggagtctcaatctcaatatattctcatgtcacat
gctgttgacattaatggtgctacagttgaagatcctatggagatcataattaaagttact
gatcaaaatgataacagaccagagttcacgatgaacacctttcttggcagaataagcgag
ggatcaccagtaggagctgtagttatgaaggtgacggctacagataaagatgaccccaca
atggacaatggtataattgggtattccatcctaaaccaagaaccccaagaaccccactct
cccatgttttccattaacaagtctggaaccattagtgtggttgcaactgggctggataga
gagaaagtacctgaatataaattgatcatccaggctgcagatttggagggtcgtggtctc
tcaaccactgccacagctgtcattactgtaacagatcagaatgaccatgctccacagttt
aaaactgcacaggaaactgttacagtaccagaaaacgaagtgggtatattggtgacgaga
ttagctgtgaccgatctggatgtgccccatacaccagcctggaatgccaaatatacaatt
gttaaaggaaacgatggaaatgtcttcaatatcagcacggaacaaggcagcaacgatgga
attctcaaaacagccaagggccttgattatgagacaagaaggcaatacaccttgtttgtg
acggttgaaaatgaagagccatttaccagtactctaccaacagccacagctaccattaca
gttaatgtagaagacgtcaatgaggctcccatttttaatccagtggtgaagagagttgta
gttgaagagaacatgcctattggaaatactgtaacagtatacactgcaacagatccagac
aaagagatgaagcagactgtaacatatcgtatggggaatgatcctgcaggatggctggaa
atcaataataatggagtgatcaaagctaagcagctgatggatagagagtctccatttgtt
aaaaataatacatatactgcaatgtttctggcattggacaatgctagcccaccagccaca
ggtacgggaactcttgtagtagaattgacagatgtgaacgacaatggtcccgaagtagtt
gaaagagaagtaagattttgtaacaagggaacaataccccaaatactgaatgttgtagac
agagacacttcggtctatgctggtccttttaaggtacaagtcctgcgggacgaggagaaa
aactggactgccaccatgaatgataaaggagaacacattattgtcacaatggccaaggag
ctaaagcaaaatgattatcttattatattgagagtgtttgacactgacaacaaataccaa
gatagtagcattaaggctatggtgtgtgattgcaaaggggatgagttctcctgccaagat
aaaataagtgacgctggctttggcttgcctgcaattctggggattttgggagccatactt
gcactgctgatcctcttgctggtactgttgctcctgctcagaagaaggaagaccattaaa
aaggagcctctgcttccagaggatgacatccgtgacaatgtcttctattatgatgaagag
gggggtggagaggaagatcaggaatatgacttgagccagctacacagaggtctggatgcc
cgacctgatgtcttccggaatgatgagctgccaactggtaatgctgtgccacagttccca
taccgtccccggccagctaacccagaggacattggcaacttcatcgatgataacctgaag
gctgctgacaatgaccccactgctcctccctatgactctctgctggtgtttgattatgaa
ggtggcggctcagaggctggttctgtcagttcactgaactcctccagctctggggatgat
caggattacgactgcctcaatgagtggggcccccgcttcaagaaacttgctgatatgtac
ggtggaggagaagactga
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