Polyodon spathula (Mississippi paddlefish): 121296348
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Entry
121296348 CDS
T07273
Name
(RefSeq) COP9 signalosome complex subunit 1-like isoform X1
KO
K12175
COP9 signalosome complex subunit 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121296348
Ubiquitin system [BR:
pspa04121
]
Deubiquitinating enzyme (DUB)
UBL-specific proteases (ULPs)
COP9 signalosome (CSN) complex
121296348
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GFIT
Motif
Pfam:
RPN7
PCI
CSN1_C
TPR_2
Antitox_RHH
TPR_11
DUF7014
TPR_1
CTD10
Motif
Other DBs
NCBI-GeneID:
121296348
NCBI-ProteinID:
XP_041077736
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Position
21:complement(25499772..25511412)
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AA seq
553 aa
AA seq
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MPLPVQVFNFQASSVSGLGGAEQSQDRIRDSSIPSSTSSSLTDLYCTPHSSRSDLLPFTS
GDYILSTSLSTCTLLFEGAVEPMQIDADPQEDQQNAPDTNYVVENPTLDLEQYASSYSGL
MRIERLQFIADHCPQLRVEALKMALSFVQRTFNVDIYEEVHRKLTGATRDVQGVPDAVPE
GGIEPPPLDSAWAESTRKKALLKLEKLDTDLKNYKGNSIKESIRRGHDDLGDHYLDCGDL
SNALKCYSRARDYCTSAKHVINMCLNVIKVSVYLQNWSHVLSYVSKAESTPEIAEQRGER
DSQNQAVLTKLKCAAGLAELASRKYKQAAKCFLLASFDHCDFPELLSSSNVAVYGGLCAL
ATFDRQELQKNVISSSSFKLFLELEPQVRDIIFKFYESKYASCLKMLDEMKDNLLLDMYL
APHVRTLYTQIRNRALIQYFSPYVSADMHMMATSFNTTVAALEDELTQLILEGLINARID
SHSKILYARDVDQRSTTFEKSLQMGKEFQRRAKAMILRAAVLRNQIHVKSPPREGSQGEL
TPANSQTRMSTNM
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgccagttcaggtctttaactttcaggcgagctctgtgtcagggttggggggt
gcagaacagagtcaggataggataagggatagctccataccaagttcaacctcttcatca
ttgacagatctttactgcaccccccacagcagtaggtcagacctacttcccttcacctca
ggagactacattcttagcaccagtctatctacatgtaccctgctctttgagggggctgtg
gagcccatgcaaatagatgctgacccacaagaagaccagcaaaatgcacctgataccaat
tatgtggtggagaatccaactttggatctggagcaatatgcatccagctacagtggtcta
atgagaattgagagactgcagttcattgctgaccactgccctcagctccgtgttgaagct
ctcaaaatggcactttcatttgtccaaagaaccttcaatgttgacatctatgaggaagtc
caccgcaagcttactggagcaaccagggacgtgcagggggttccagacgcagtccctgaa
ggtgggatcgaacctcctcctctcgactcagcctgggcggagtcaaccaggaaaaaggct
ctgctaaaactggagaaactagatacagacctgaagaactacaagggaaactcgattaaa
gagagcatcaggaggggtcatgatgacctgggagatcactatctagactgcggtgatctt
agtaacgccttgaaatgctactcgcgagcccgagactactgcaccagcgccaaacacgtt
atcaacatgtgtcttaatgttatcaaggttagcgtttacctacagaactggtcccacgtt
cttagctacgtcagcaaggcagaatctactccagagatagcagagcaaaggggggaaaga
gacagtcaaaatcaggcagttctaaccaaactaaagtgtgctgcaggcttggcagagtta
gcttctcgaaaatacaaacaggctgccaagtgcttcttgctggcttcatttgatcactgc
gacttccctgagcttctctcatctagtaatgtagcagtttatgggggattgtgcgcactg
gcaacatttgacaggcaagaattgcaaaagaatgtaatttctagcagctcttttaaatta
tttttggaattggagcctcaagttcgtgacattatctttaagttttatgaatcaaagtat
gcttcctgtctaaaaatgctggatgaaatgaaggataaccttctcctagacatgtacctg
gcccctcatgtaaggacactgtatacgcagatccgaaaccgagctcttatacagtacttc
agtccctacgtttcagcagacatgcacatgatggcgacctcgttcaacaccacagtggct
gctttggaggatgagctgacacaactgattctagaggggttaatcaatgcaagaatcgac
tcgcatagcaagattttgtatgccagggatgtggatcagagaagcacaacgtttgaaaag
tctttacagatgggcaaagagtttcagagacgagctaaagccatgatactgagggctgca
gtgctacgtaatcagatacacgtaaagtcccctccaagagaaggcagccaaggggaactc
acacctgcaaacagccaaacacgaatgagcaccaatatgtga
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