Polyodon spathula (Mississippi paddlefish): 121296352
Help
Entry
121296352 CDS
T07273
Name
(RefSeq) hepatocyte growth factor-regulated tyrosine kinase substrate-like isoform X1
KO
K12182
hepatocyte growth factor-regulated tyrosine kinase substrate
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03250
Viral life cycle - HIV-1
pspa04144
Endocytosis
pspa04145
Phagocytosis
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
121296352
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
121296352
04145 Phagocytosis
121296352
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121296352
Membrane trafficking [BR:
pspa04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-0 complex
121296352
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VHS
Hrs_helical
FYVE
ELMO_ARM
UIM
RasGEF_N_2
FYVE_CARP1-2
Cnd1
Motif
Other DBs
NCBI-GeneID:
121296352
NCBI-ProteinID:
XP_041077740
LinkDB
All DBs
Position
21:24224696..24239347
Genome browser
AA seq
781 aa
AA seq
DB search
MGKGGGAFERLLDKATSQLLLETDWESILQICDLIRQGDAPAKYAIGAIKKKLNDKNPHV
ALYALEVLESVVKNCGQTVHDEVASKQTMEELKDLLKSEPSVRNKILYLIQAWSHAFRNE
PKYKVVQDTYQIMKVEGHVFPEFKESDAMFAAERAPDWVDAEECHRCRVQFGVMTRKHHC
RACGQIFCGKCSSKYSTIPKFGIEKEVRVCEPCFEQLNKKAEGKAAGSSELPPEYLTSPL
SQQSQVVVGGSVPPKRDEAALQEEEELQLAIALSQSEAEEKDRMRQKPTYSVYPKADPTP
VTSSAPPVSTLYTSPMNSSAPAAEEIDPELARYLNRTYWEKKQEEVRKSPTPSAPVPMVE
PIPISQPVEAHPAPPINVVEQQYQNGESDENHEQFVKALQNAVPTFLNRMKSNHMRGRSI
TNDSAVLSLFQSINNMHPQLLDLLNQLDEKRLYYEGLQDKLAQVRDARGALNALRDEHRE
KLRCAAEEAERQRQIQLAQKLEIMRQKKQEYLEMQRQLAIRRLQEQEKERQMRLEQQKQT
IQMRAQMPAYSLPYAQVCPQSCWEPDNPIRNSLTDCVCPLQLQSLPAAGGVMYQPSGPTS
YPGSVEGSPMHTVYMNQPAQSSTAPYPGMPVPGTDPNMVGAYMYQPGASTGQTTQQGQAV
PTTNPAYSSYQPTPTQGYQNVASQSQNIPPISQPPQSSGMGYMGPQSMPMGYQPYNMQNM
MSALPSQDPNMPPQQPYIQGQQPMYQQMAPPGGPQQQMQQQQQQQQQQHGGGGEAQLICF
D
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atgggaaaaggaggaggcgcgttcgaaaggcttcttgataaagccaccagccagctgctc
ctggagacagattgggaatccattttgcagatatgcgacctgattcgtcaaggagatgcc
ccagctaaatatgctattggcgccatcaagaagaaactcaatgacaagaaccctcatgtg
gccctttatgctttagaggttctggagtctgttgtaaagaactgtggccaaacagtacat
gatgaggtggcaagcaagcaaactatggaggaactgaaggatctccttaagagtgaacca
agcgtacggaacaaaattctctacctaatccaggcctggtcacatgctttccgcaacgag
cccaaatacaaagtggtccaggatacctaccagatcatgaaggtggaaggtcatgttttc
cctgaatttaaagagagtgatgccatgtttgcagctgagagggctcctgactgggttgat
gcagaggagtgccaccggtgcagagtccagtttggggtcatgacaagaaagcatcactgt
cgggcatgtggacagatcttctgtgggaagtgttcctccaagtactccaccatccccaag
ttcggaatagagaaggaagttcgggtctgtgagccctgctttgaacagctcaacaaaaaa
gctgaaggcaaggctgctggctcttcggagctgccccccgagtacctaaccagcccgcta
tctcagcagtcacaggtagtggttggtggctcagtgcccccgaaacgtgacgaggctgcc
ctgcaggaggaggaagagcttcagctcgctattgccctgtcccagtctgaggcggaggag
aaggatcggatgaggcagaagcccacatattcagtgtaccctaaagctgaccccacccca
gtgacatcatcagccccgccagttagcactctgtacacttctccgatgaactcttctgct
ccagctgcggaagaaatagatccagagcttgcacgctacctgaacaggacctactgggaa
aagaagcaggaggaggttcggaagagccccaccccttccgccccagtgcccatggttgag
ccaatcccaatcagccagcctgtggaggctcacccagcacctcctatcaacgttgtggag
cagcagtaccagaacggggagtcggacgagaatcatgagcagttcgtgaaggcgctgcaa
aatgccgtccccactttcctcaaccgcatgaagagcaaccacatgaggggccgcagcatc
accaacgacagtgctgtgctctccctcttccagtccatcaacaatatgcacccccagctg
ctggacctgctcaaccaactcgacgagaagcgattgtactacgagggtctacaagacaag
ctggcacaggtccgcgatgcccgtggggcactgaatgctctgcgggacgagcatcgtgag
aaactgcgctgtgctgctgaggaagctgagcgccagaggcagatacagctcgctcaaaaa
ctggagatcatgaggcagaagaagcaggagtacctggagatgcagaggcagctggcgatt
cggcggctgcaggaacaggagaaggagagacagatgcggttggagcagcagaaacagacc
attcagatgagggcccagatgccagcctattctctaccctatgcacaggtctgtccgcag
agctgctgggaaccggataacccaattcgcaatagcctgactgactgtgtttgccctctc
cagttgcagtcgctgcccgctgccgggggtgtgatgtaccagccctctggccccaccagt
taccctggctcagtggagggctcgccaatgcacactgtctacatgaaccagccagcacag
tctagcactgcgccgtacccaggaatgcctgtgcctggcactgacccaaacatggtgggt
gcgtacatgtaccagccaggagcctccactgggcagacaactcagcagggccaggctgtg
cccaccacaaacccagcctactccagctaccagccgacacccacacaaggataccagaat
gtggcatcccagtctcaaaacattcctccaatatcccagcctccccagtccagtgggatg
gggtacatggggccacagtctatgcccatgggataccagccctataacatgcagaatatg
atgtctgccctgcctagccaggaccccaacatgcctccacagcagccctacatacagggt
cagcaacccatgtaccaacagatggcgccccctggtggcccgcaacagcagatgcagcag
cagcagcagcagcagcagcagcagcatggaggaggtggggaggcacaactgatctgcttt
gactga
DBGET
integrated database retrieval system
