Polyodon spathula (Mississippi paddlefish): 121296353
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Entry
121296353 CDS
T07273
Name
(RefSeq) serine/arginine-rich splicing factor 2-like isoform X1
KO
K12891
serine/arginine-rich splicing factor 2/8
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040
Spliceosome
pspa05168
Herpes simplex virus 1 infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
121296353
09160 Human Diseases
09172 Infectious disease: viral
05168 Herpes simplex virus 1 infection
121296353
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pspa03041
]
121296353
Spliceosome [BR:
pspa03041
]
Common components
Common spliceosomal components
SR proteins
121296353
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RBD_AKAP-17A
RRM_PARP14_3
RRM_3
RRM_occluded
RRM_8
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
121296353
NCBI-ProteinID:
XP_041077749
LinkDB
All DBs
Position
21:complement(18774579..18778612)
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AA seq
225 aa
AA seq
DB search
MSYGRPPPDVEGMTSLKVDNLTYRTSPETLRRVFEKYGRVGDVYIPRDRYTKESRGFAFV
RFHDKRDAEDAMDAMDGAVLDGRELRVQMARYGRPPESHHGRRGGPPRRYGSSGRRSRSP
RRRRRSRSRSRSRSRSRSRSRYSRSRSRSYSRSRSRSKTRSPRRIKSKSKSKSLSRSKSK
SRSRSKSKSHSRSRSRTPVSARNSKSRSRSKSVPKSPEEEGAVSS
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atgagttatggtaggccaccgcccgatgttgagggaatgacttctctcaaggtggataac
ctgacgtaccgcacctcgccggagaccttgcggcgggtttttgagaagtacgggcgggtc
ggggacgtgtatattccccgagaccgctacactaaggagagccgcgggttcgcctttgtg
cggttccacgacaagcgtgatgcagaggacgcgatggacgcaatggacggcgcggtgctg
gatgggcgggagctgcgcgtccagatggcccgctacggacggccgcctgagtcacaccac
gggcgccgaggaggcccgccacgaaggtatgggagctccgggaggagaagcaggagtcct
cgacgacgcagacgcagtcgctcccgaagcaggagtcgttcaaggtcccgcagccgctcg
cggtacagcagatcaagatcccgttcctactcccgctccaggtctcgctccaaaactcgt
tccccacgcagaatcaagtccaaatctaagtcaaagtctttgtccaggtctaagtcaaag
tcgcggtccaggtctaagtccaagtcccactccaggtcccgaagccgcacaccagtctct
gccagaaactccaagtccaggtcgaggtccaagagcgtgcccaagtctccagaagaggag
ggagcagtgtcctcataa
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