Polyodon spathula (Mississippi paddlefish): 121296367
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Entry
121296367 CDS
T07273
Name
(RefSeq) rho guanine nucleotide exchange factor 38-like
KO
K20711
Rho guanine nucleotide exchange factor 38
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pspa04131
]
121296367
Membrane trafficking [BR:
pspa04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
121296367
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Gene cluster
GFIT
Motif
Pfam:
RhoGEF
SH3_2
BAR
SH3_9
SH3_1
Motif
Other DBs
NCBI-GeneID:
121296367
NCBI-ProteinID:
XP_041077793
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Position
2:40194380..40219184
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AA seq
775 aa
AA seq
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MEPKEPIDKEKEKGAKKKNMIFSKPRMYILERRKTDTIVAENIAVDCIGDVNSATLRRSQ
SDRTEYNKKLKEKMAPQEMLTPPPSPTIDLEELKKRMMGKRSKVIHELVQTEKDYLIDLE
LCIKEVVQPLRDTQVVDVDRLFINIESVSELSAKLLSKLEEAIAEVDPERQIIGETFIQI
KSSLEEVYKIYCYHHDDANSLLKSYEKDEEVKQHFRNCVLSLKKIYDNEGKTNLLDMGSL
MIKPVQRVMKYPLLLGELWNSTPDCHPDNKPLEEALATVKRINTNINEFKRRKDIVMKYK
RNEELGTLMNKLNRLSIHSFKKNASRVTSHLKILTGGESQVKDERFDKEEKMFRNLEKAV
RQLGKNVYCYFQYTQEIVSLVVQNTEELQIILQDPDKSDSHAPPNKKNSGNPYIHFKDKL
ERMVLIPLSTLQSMFSAPQKLIQKRYDKLLDYDSRLERSSPDELEMARRDYEALNAQLVE
ELQLFNPAAKKILTNCIYCFVALLRDLMDSASRESPSIQNLLAPLSNIHEVQNSVMEELN
NLIFVKENAPKLIERKLSFDKHKKYVPEIPRQSEAHRSKLLSNHSPDKLYQLKRNCNATQ
EQDLSLFEGELVAVVEQQDPFGSTSRWLVDTGSHQGYVYSSFLKQYNPTKEHNGTLHNQQ
EDFDNISLFISGNGSSSLKSFSIAHSDSSSSLNGIHEKAEVDGNHFCGESDDQQIFYAVY
AFEARSEQELSLQEYQHVRIVKFCDVSGNKDWWLAEANGQKGYVPANYLGKMSYA
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggaaccaaaggaacccattgataaagaaaaggaaaaaggagcaaaaaagaaaaatatg
atattctcaaaacctcggatgtacatcttagaacggaggaaaactgacacaattgttgct
gagaatattgctgttgactgtataggagatgtcaactctgccaccctcagaagaagccaa
tctgacaggacagaatacaacaaaaaacttaaagagaaaatggcaccgcaagaaatgtta
acaccacccccatccccgaccatcgatctggaagagctgaagaagaggatgatgggcaag
aggtctaaagttatccatgaactggttcagacagagaaagattacctcattgatcttgag
ctctgtattaaggaagttgttcagccactgagagacacacaggttgtggatgtggaccga
ctgtttattaacattgaatctgtcagtgagttgtcagctaaactgttgtccaaattagaa
gaggccatagcagaagtggatcctgaaaggcaaataattggtgaaacgttcatacagatt
aaatcttcgctagaggaagtctataaaatttactgctatcaccatgacgatgccaacagt
ttattaaagtcctatgaaaaagacgaagaagttaaacagcatttcagaaactgtgttctg
tcgctgaaaaagatatatgacaatgaaggaaagacaaatttgttagacatgggatccctc
atgattaaacctgttcagcgtgtgatgaagtacccactgcttttaggtgagctgtggaat
tctacacctgactgccacccagacaacaaacctctggaagaagccctagcaacagtgaaa
agaatcaacaccaatatcaatgaatttaaacgaagaaaagacatagtgatgaagtacaag
agaaatgaggaattgggaactctgatgaacaaactaaacaggctgagtattcattccttc
aagaagaatgcaagccgagtcaccagtcacctcaaaattctgacaggaggggaatcccag
gttaaagatgagagatttgacaaagaagaaaaaatgttcaggaatcttgaaaaagctgta
cggcagttagggaaaaatgtttattgttattttcaatacacacaggaaatagtctctcta
gttgtccagaatactgaggagcttcaaattattctacaggatccagacaagtctgatagt
cacgctcctccaaacaagaaaaacagtggcaatccatacatacattttaaagacaagctg
gaaagaatggtcctgatacctctgtctacattgcaatccatgttttcagcacctcagaag
ctcattcagaaacgctacgataaactgcttgactatgacagccgtctggagaggtcctca
ccagacgagctggagatggcacgtagagactatgaagcactcaacgctcagctggtagag
gagctccagttgtttaaccctgcagctaagaaaatattaacaaactgtatttactgcttt
gttgctctccttcgggatctgatggattctgcatctcgtgaatctccatcaatacaaaat
ttgcttgcacctttgtctaacatccacgaagttcaaaacagtgtcatggaagaacttaat
aacttgatctttgtgaaggagaatgctccaaagttaattgaacgaaaattgagttttgat
aaacataagaaatatgtgcctgagattccacggcagtcagaagcccaccggtccaagctg
ttatcaaaccactctccagacaaactctaccagctgaagcgcaactgcaacgccactcag
gagcaggacttgagtctgtttgagggggagctggtggctgtggtggaacagcaggacccc
tttgggagtacaagtagatggcttgtcgacactggcagccatcagggttatgtttactct
tcattcctaaagcaatacaaccctacaaaggaacacaatgggacattacataaccaacag
gaggactttgacaacattagccttttcatctctggtaatgggagcagcagtttgaaaagc
ttcagcattgcccacagtgacagcagttcctctctcaatggaatacacgagaaggctgag
gtcgatggaaaccatttttgtggcgaatcagatgaccagcagatcttctatgctgtgtat
gcatttgaagctcgaagtgagcaggagctaagcttgcaggaataccagcatgtgaggata
gtgaagttctgcgatgtgagtggcaacaaagactggtggctggctgaggccaatggtcag
aaaggctatgtacctgccaactacctaggcaagatgtcatatgcataa
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