Polyodon spathula (Mississippi paddlefish): 121296380
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Entry
121296380 CDS
T07273
Name
(RefSeq) tumor necrosis factor receptor superfamily member 3-like isoform X1
KO
K03159
lymphotoxin beta receptor TNFR superfamily member 3
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04060
Cytokine-cytokine receptor interaction
pspa04672
Intestinal immune network for IgA production
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04060 Cytokine-cytokine receptor interaction
121296380
09150 Organismal Systems
09151 Immune system
04672 Intestinal immune network for IgA production
121296380
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04050 Cytokine receptors [BR:
pspa04050
]
121296380
Cytokine receptors [BR:
pspa04050
]
Tumor necrosis factor receptors
TNF receptor superfamily
121296380
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Ortholog
Paralog
GFIT
Motif
Pfam:
TNFR_c6
Motif
Other DBs
NCBI-GeneID:
121296380
NCBI-ProteinID:
XP_041077807
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Position
21:17225496..17252767
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AA seq
412 aa
AA seq
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MMFRCLSIQLCLWFWILLVTEAAPGLIFPYVPENGYCTDSRTEYLSGGVCCQRCPPGQFA
LRKCTATSNTDCSSCPENTFTELYNYAPNCMLCRTCESGLVMSSPCTKTRKSVCVCPKNS
ICIGEPPSRCESCEDHNPCQPGTYTSQRGDLVQHPQCSPCPAGTFNDLPSITARCSRHRN
CTELGKVQAKSGTLKSDAVCKDPKVVMDTGYLGSLILLAVLAMLVIGAIAGAHYCLRRKQ
QHNDKDHTPGSGRDTEQSSLLSPSGSIISSTSSIPKSPAPSAGSTPPLIDVPHLLTAVQG
AEHETHSRASNGLQCGREAGQQERLCQVPFIGEMKVSGNVYIYNGPVVNQASPSSEQPRD
TSPLPSSSPPVSHFRLPVQEDRSAVPVQEQQGAPLQESGKESHITIEETNSY
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgatgtttcgctgtttatccattcagctttgcctgtggttttggattctacttgtaact
gaggcagctcctgggctgatttttccgtatgttccagaaaatggttattgtacagattcc
agaacagaatatctctctggtggggtttgctgccagaggtgccctccaggtcagtttgca
cttcgcaaatgcacagccacatccaatactgattgcagcagctgtccagagaatactttc
actgaactatataactacgcacccaactgcatgctgtgtagaacttgtgagtctggtctg
gttatgtcttcaccttgcaccaagaccaggaagagtgtctgtgtttgtcctaaaaacagc
atctgtattggagagccgccctcgagatgtgagtcctgtgaagatcacaatccatgccag
cctggcacctatacatcacaacgaggagatttggtgcagcacccccagtgttccccttgc
ccagccggcaccttcaatgacctcccctccatcacagcacgctgctcccggcacagaaac
tgtacagaattggggaaggtgcaggcaaaatcagggacactcaaatcagacgctgtgtgc
aaggaccccaaggttgtcatggatacaggctatctggggtccttgattctcctggcagtc
cttgccatgctggtcattggagccatcgctggtgcccactactgtttgagaaggaaacag
cagcacaatgataaagaccacaccccaggctcaggcagggacaccgagcagtccagttta
ctgtctccaagtggaagcataatctcctcgacatccagcatcccaaagtcccctgctccc
tccgcaggctccacccctcccctcattgacgtccctcatttgttgactgctgtgcagggg
gcggagcatgagacacacagcagggcttccaatggtctacagtgtggcagggaggcgggt
caacaggagaggctgtgtcaggttcccttcattggagagatgaaggtcagtggaaatgtt
tacatttacaatggtcccgtcgtgaaccaggcttctcccagctcagaacagcccagggac
accagcccccttcccagttcctctcctccagtttcccacttcaggctcccagtgcaggag
gatcggtctgcagtaccagtgcaggagcagcagggggctccactgcaggagtcagggaag
gagtcgcacatcaccatcgaggagacaaactcatactaa
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