Polyodon spathula (Mississippi paddlefish): 121296434
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Entry
121296434 CDS
T07273
Name
(RefSeq) lymphoid enhancer-binding factor 1-like isoform X1
KO
K04492
lymphoid enhancer-binding factor 1
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04310
Wnt signaling pathway
pspa04520
Adherens junction
pspa04916
Melanogenesis
pspa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121296434
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
121296434
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
121296434
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
121296434
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pspa03000
]
121296434
Transcription factors [BR:
pspa03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
121296434
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
HMG_WDHD1
Motif
Other DBs
NCBI-GeneID:
121296434
NCBI-ProteinID:
XP_041077942
LinkDB
All DBs
Position
2:complement(40815788..40883035)
Genome browser
AA seq
328 aa
AA seq
DB search
MQAARRVLQDSYHEKHREHCDDGKHHDSLYNKGHPYPGYPGYIMMSNMNNDCYMPNDSLS
PPMARTSNKVPVVQPSHAVHPLTPLITYSDEHFAPGPHSGHHPQEVDSKQGIHRHHHHPV
PDMANFYSLSPGGVEQITPPLGWQGQPMYPISSGFRQQYPSTLPGDTPMSRFSHHMVPGP
PGPHATGIPHPAIVNAQVKHEHPHDHDLMHMKPQHEQRKEQEPKRPHIKKPLNAFMLYMK
EMRANVVAECTLKESAAINQILGRRWHALSREEQAKYYELARKERQLHMQLYPGWSARDN
YGKKKKRKREKIQETTSGTGQRMKTAYI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcaggcagctagacgagtgctgcaggattcttaccatgagaaacacagagaacactgt
gatgatggaaagcatcatgacagcttatacaacaaaggtcatccttacccaggctatccc
ggatacatcatgatgtcaaacatgaacaatgactgttacatgcccaatgactctttgtct
cctccgatggccagaacgtcaaacaaggtaccagtggtccagccatcgcatgcagttcac
ccacttactcctctgatcacctacagcgatgagcactttgcacccgggcctcactcggga
caccacccccaagaagtcgactccaaacaaggcatacatagacatcatcatcatcctgtt
cctgacatggccaatttttattcactgtcgcctggaggagttgaacagattaccccgcct
cttgggtggcaaggtcagcctatgtatccaatctcaagtggtttcagacaacagtacccc
tccactctcccaggtgacacccccatgtccaggttttcacatcacatggtgccaggtccc
cctggaccccatgcaactggcatccctcaccctgccattgtgaacgctcaagtcaagcac
gaacacccgcacgaccatgacctaatgcacatgaaacctcaacatgaacagagaaaagag
caagagcccaaaagacctcacatcaagaagcctctaaatgcttttatgttgtacatgaaa
gaaatgagagcaaacgtagtagcggagtgtacgctgaaggaaagtgcagccatcaatcag
atcctggggaggaggtggcatgcactgtctcgggaagaacaagctaaatattatgaattg
gcccgcaaggaaaggcagcttcacatgcagctttacccaggctggtctgcaagagacaat
tatggaaagaagaagaagaggaagagagagaagatccaggaaaccacttcaggtacaggc
cagagaatgaaaactgcgtacatctga
DBGET
integrated database retrieval system
