Polyodon spathula (Mississippi paddlefish): 121296448
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Entry
121296448 CDS
T07273
Symbol
nup93
Name
(RefSeq) nuclear pore complex protein Nup93 isoform X1
KO
K14309
nuclear pore complex protein Nup93
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
121296448 (nup93)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121296448 (nup93)
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
121296448 (nup93)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nic96
Motif
Other DBs
NCBI-GeneID:
121296448
NCBI-ProteinID:
XP_041077967
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Position
21:2513723..2534175
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AA seq
820 aa
AA seq
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MDAEGFGELLQQAEQLAAETEAISELPHVERNLQEIQQAGERLRARTLTRTSQETADVKA
SILLGSRGLDISHISQRLESLSAATTFEPLEPVKDTDIQGFLKNERDNALLSAIEESRRR
TFVTAEEYHRESMLVEWEQVKQRILHTLLASGEDALDFTQEAEPSFLSDTGPSGRSALDS
VEVAYGRQIYVFNEKIVNGHLQPSLGDLCASVAERLDDKNVSEMWAMVKQMTDVLLVPAR
DTLNSRTSVEMQMAFVSRALQFLEQSYKNYTMVTVFGNLHQAQLGGVPGTYQLVRSFLNI
KLPGPLPGLQDGEVEGHPVWALIYYCMRCGDLVAAMQVVNRAQHQLGEFKNWFQEYMSST
DRRLAPTAENKLRLHYRRALRNNTDPYKRAVYCLIGKCDITDNHGEVADKTEDYLWLKLN
QVCFEEDSTNSPQDRLTLPQLQKQLLEDYGESHFAAGQQPYLYFQVLFLTAQFEAAVAFL
FRIERLRSHAVHVALVLYELRLLLMSSGHSARLLSQEHGDPPMIRRLNFIRLLMLYTRKF
ESTDPREALQYFYFLRNEKDSQGENMFMRCVSELVIESREFDMLLGRLEKDGSRKPGVID
KFAGDTRAIIGKVATEAEHKGLFEEAVKLYELAKNPDKVMGLMNKLLSPVVSQASAPQSN
RERLKNMALAIAERYRSQGISAEKSVDSTFYLLLDLITFFDEYHAAHVDRAYDVMERLKL
VPLSQDSVEERVAAFINFSDEVRHNLSEVLLATMNILFTQYKRLKGTTPASPARPQRALE
DRDSQLRTQARALITFAGMIPYRMAGDTNARLVQMEVLMN
NT seq
2463 nt
NT seq
+upstream
nt +downstream
nt
atggatgctgaaggattcggggagctgctccagcaggctgagcagctggctgcggagacg
gaggcgatctcggagctgccccacgtggaacgaaacctccaggagatccagcaggcgggg
gagaggctgagggccagaaccctgacccgcacctcgcaggaaactgccgatgtcaaggcc
tccattctgcttggctccagaggactggatatttctcacatctctcagcgactggaaagt
ctgagtgcagctacaacatttgaacccctcgagccagtgaaggacacagatatacagggc
tttctgaagaatgagcgtgacaatgcactgctgtcagccatcgaggagtccaggaggagg
accttcgtcactgcggaggagtaccacagggagtcgatgctggtggagtgggagcaggtg
aagcagaggatactgcacacgctgctggcttcaggagaggacgcactggacttcacccag
gaagccgagcctagtttcctcagcgacacgggtccttcaggacgcagtgctctggatagc
gtggaagtggcttacggacggcagatttatgtgttcaacgagaaaatagtaaacggacac
ctgcagcccagcctgggggacctgtgtgcttctgtagcagaacgtctggatgacaagaat
gtctctgagatgtgggccatggtgaagcagatgacggatgttctgctggttcctgctcgg
gacacgctgaacagccgcaccagcgtggagatgcagatggcgtttgtgagtcgggccctg
cagtttcttgagcaaagttataaaaactacaccatggtgacagtcttcggtaacctgcac
caagctcagctgggaggagtgcccgggacctatcagcttgttcgcagttttcttaatata
aagctgcctggcccccttccagggctccaggacggggaggtggaagggcatcccgtgtgg
gctctgatctactattgcatgcgctgcggggacctggtggcagccatgcaggtggtgaac
cgagcgcagcaccagctgggagagttcaagaactggtttcaggagtacatgagcagcact
gacagacgattggctcccacagcagaaaacaagcttcgactgcattacagacgagccctg
agaaacaacacagacccctataagagagccgtgtactgcctgatcgggaagtgcgacatc
accgacaaccacggcgaggtggcggacaagaccgaggattacctttggctcaagctgaac
caggtttgcttcgaggaagactccaccaactctccacaggacaggctgaccctgccacag
ctccagaaacagctgcttgaagattacggagagtcgcacttcgctgccggtcagcagccc
tacctgtatttccaggtgctgttcctgacggctcagtttgaggcggccgtcgccttcctg
ttccgtattgagcggctgcgcagccacgccgtgcacgtggccctggtgctctacgagctc
agactcctcctgatgtcgtctggtcacagcgcacggctcttgagccaggagcatggggat
cccccaatgataagaagattgaatttcatccgtctgttgatgctgtacacaagaaagttt
gagtcgaccgacccgagagaagcgcttcagtacttttattttctcagaaacgagaaagac
agccaaggagaaaacatgttcatgcgatgtgttagtgagcttgtcattgaaagcagagag
tttgacatgctccttgggagacttgaaaaagatggcagcagaaagccaggagtaattgat
aagtttgctggagacacgagggccatcattggcaaagttgcaacggaggcagagcacaaa
ggattatttgaagaagctgttaaactatatgaacttgcaaagaatccagacaaggtaatg
gggctgatgaacaagctgctcagtcctgtggtctcacaggccagtgcccctcagtctaac
agagagaggttgaagaacatggccctcgccattgcagagcggtatagatctcagggcatt
tctgcagaaaagtcagttgacagcactttctatcttctgctggaccttataacctttttt
gacgagtatcacgctgctcatgttgaccgcgcgtatgatgtaatggagcgtctcaaattg
gttccactcagccaagacagtgtggaggagagggtcgctgccttcataaacttcagtgat
gaagtcagacataacttatccgaagtgctcctggccaccatgaatattctgttcactcag
tacaagaggttaaagggcacgaccccagcatcccccgcaaggccccaaagagcgctggag
gaccgggactctcaacttcgaacccaagcccgtgctctgatcacattcgcgggtatgatt
ccgtaccgcatggcgggagacaccaacgctcgactggtgcagatggaggtgctcatgaac
tag
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