Polyodon spathula (Mississippi paddlefish): 121296457
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Entry
121296457 CDS
T07273
Name
(RefSeq) Wilms tumor protein 1-interacting protein homolog isoform X1
KO
K16682
LIM domain-containing protein
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pspa03019
]
121296457
03036 Chromosome and associated proteins [BR:
pspa03036
]
121296457
Messenger RNA biogenesis [BR:
pspa03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
121296457
Chromosome and associated proteins [BR:
pspa03036
]
Eukaryotic type
Sister chromatid separation proteins
Aurora kinases
Regulators of Aurora kinases
121296457
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LIM
zf_RING_Vps8
Motif
Other DBs
NCBI-GeneID:
121296457
NCBI-ProteinID:
XP_041077984
LinkDB
All DBs
Position
21:complement(12464053..12521068)
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AA seq
708 aa
AA seq
DB search
MDKYEEDIGLKASKFIENLSVYEACKDGLYSGRRDVLINPDLDLAGQMITNHKSKAANGN
AQQQFRQQQYSGENYQAGNKVYNAPPLRPVNGNRDAPSDICNPQREMVYCEDGHCTKSEV
ALPCYSGISERNRRYSLEAQSHRYSTDSAYDGAVVNKQGSLSVYPSSVTRSNNVCVSTSQ
DGRYNATSPRSSLSSSMSSQEQSKHTSPRSSLVVPGQDRYTSPRSSLVQYDPSSMLSPRS
SYASTVSDTSKHSSPRASLNSYDCGSKPSSNRTSGISMGYDQRHISPRSSTASQYSCTPS
PRSSYSDSRYVSSGNTEHEGTIVHGVPVVSPRASICSQEGSNRPGVASNCNPCVISPRSS
ISSHSSKSSRSSRGSMTAYPDLQQLSPRSSILGPGLQEESVVNDFGDSRIYPQLFPARHA
QQPSQVGLNTDAAASVPAPFNYCSPARTSAPAQKFKLPYQVTPSRESGPSQAERRLEALT
LELEKELEMHMKKEYFGICIKCGKGVYGASQACQAMGNLYHTNCFICCSCGRRLRGKAFY
NVNGKVYCEEDFLYSGFQQTADKCFVCGHLIMETILQALGKAYHPGCFRCVVCNEGLDGV
PFTVDMENNIYCVKDYHTVFAPKCASCNQPILPAQGSEETIRVVSMDRDYHVECYHCEDC
GLQLNDEEGHRCYPLDGHLLCHGCHIRRLKIQVPPHPPPGYPMHVTEL
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atggataagtatgaggaggatatcggattgaaagcgagtaaattcatagagaacctttct
gtgtacgaagcttgcaaagatggactttacagcgggagaagggacgtgctgattaacccc
gatttggatttagctggacagatgattacgaaccacaaaagtaaagcagcgaatggcaac
gcacagcagcagttccgccagcagcagtactcaggcgaaaattaccaggctgggaataaa
gtttacaacgcgccccctttgcgcccagtcaacggcaacagggatgctccctcggatatt
tgcaacccacaaagagagatggtttattgtgaagatggccattgcaccaaatctgaagtt
gccttgccgtgctacagcgggatttccgagaggaaccggaggtattctttagaggcgcag
agccataggtacagcacggatagtgcatatgacggagcggtcgtgaacaagcaaggatcc
ttatctgtctacccaagctcggtcaccaggagcaacaatgtgtgcgtcagtaccagtcaa
gacggcaggtacaatgccaccagccccaggtctagcctgtcttcttccatgtcttcccaa
gagcaaagcaagcacacaagccccagatcgagcttggtggtacccgggcaggacagatac
accagcccccgatcaagcctagtgcaatacgacccgagcagtatgctgagcccccggtct
agttatgcaagcactgtcagtgataccagcaagcattccagtccccgggccagcttgaat
agctacgattgcgggagcaagcccagcagtaaccgcaccagtggcatcagtatggggtat
gaccaacggcacatcagccctagatcaagcactgcaagtcagtactcgtgcaccccgagt
ccgaggtccagttactcggattcgcgttatgtgtcatctgggaacaccgagcacgagggc
acaatcgtgcatggcgttccagtggtcagcccccgtgcgagcatttgcagccaggaaggc
agcaacagacccggggtagccagcaactgcaacccgtgtgtgattagcccacggtccagc
atctctagccacagctccaaaagctcccggagttcgaggggctccatgaccgcttaccca
gaccttcagcagctctcgcccaggtcgtccatcctgggtccgggtttgcaggaggaatcg
gtggtgaatgatttcggagatagcaggatctatccccagttgttcccagcaaggcatgcg
cagcagccgtctcaggtcggattaaacacagacgccgcagcgagtgttccggcacctttt
aactactgcagccccgcgagaacctcggccccggcgcaaaagtttaagctgccttaccaa
gtcaccccatcccgggaaagtggcccaagccaggcagaaagaagactagaagccctaaca
ttggaactggagaaggagttggagatgcacatgaaaaaggaatattttggaatctgtata
aagtgtgggaagggggtgtatggagcaagtcaggcctgccaggcaatgggtaacctctat
cacaccaactgcttcatctgctgctcctgcgggcgaaggttaagaggaaaggcattctac
aatgtcaatggtaaagtttactgtgaagaagatttcttgtattccgggttccagcaaaca
gcagacaagtgctttgtgtgtggccacctcataatggagacgattctgcaggccctaggg
aaggcctaccaccctggctgtttccgctgtgtggtctgtaacgagggcttagacggggtc
cctttcacagtcgacatggagaacaacatctactgcgtcaaggactatcacacagttttc
gcacccaagtgcgcgtcgtgtaaccagcccatcctgcctgcacagggttctgaggaaaca
atccgggtggtgtcaatggatagagactatcacgtggaatgctatcactgtgaggactgc
gggctccagctgaacgatgaggagggtcaccgctgctaccccttggacggccacctcctc
tgccatggctgtcacatccgccgcctcaagatccaggtgccgccccaccctccccccggc
taccccatgcacgtcaccgaactgtga
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