Polyodon spathula (Mississippi paddlefish): 121296461
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Entry
121296461 CDS
T07273
Name
(RefSeq) ras-related protein Rab-40B
KO
K07928
Ras-related protein Rab-40
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121296461
09183 Protein families: signaling and cellular processes
04031 GTP-binding proteins [BR:
pspa04031
]
121296461
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul5 complex
Target recognizing subunit
121296461
GTP-binding proteins [BR:
pspa04031
]
Small (monomeric) G-proteins
Rab Family
Rab40
121296461
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
SOCS_box
Arf
MMR_HSR1
Motif
Other DBs
NCBI-GeneID:
121296461
NCBI-ProteinID:
XP_041078000
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All DBs
Position
21:complement(23779710..23826005)
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AA seq
278 aa
AA seq
DB search
MTNRGSPVKAYDFLLKFLLVGDSDVGKGEILSSLQNGASESSYGYNMGIDYKTTTILLDG
RRVKLQLWDTSGQGRFCTIFRSYSRGAQGVILVYDITNRWSFDGIDRWIKEIDEHAPGVP
KILVGNRLHLAFKRQVTTEQAQVYAERLGITFFEVSPLCNFNITESFTELARIVLMRHGM
ERLWRPNKVLSLQDLCCRSIVSCTPVHLVDKLPLPVALKSHLKSFSMANGLNARMMHGRS
YSLTASNGNKRNSLKKTKMIGPPQSPSQSCARKSCKIS
NT seq
837 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacagaggcagcccagtgaaggcttatgattttctgctcaagttcctgctggtc
ggagacagcgatgttgggaagggagaaatcttgtcaagtctgcagaatggagccagtgag
tcttcttacggatacaacatggggattgattacaagaccacaaccattctgctggacgga
cggagggtaaaactgcagctgtgggacacatctggccaggggaggttctgcacgatattc
cgctcctactccagaggtgcccagggcgtgatcctggtttatgacatcaccaatcgctgg
tcatttgatggtattgacaggtggatcaaggagattgatgagcatgcaccaggtgttcct
aagatcctggtgggaaatcgtcttcacctggccttcaagagacaggtgactacagagcag
gcccaggtctacgcagagcgcctcggcatcaccttcttcgaggtgagccctctgtgtaac
ttcaacatcaccgagtccttcacagagctggcccggatcgtactgatgaggcacgggatg
gagaggctctggaggcccaacaaagtgttgagccttcaggacctctgctgtcgatccata
gtgtcctgcacccctgttcacctggtggacaagctccctctccctgttgccttaaaaagc
cacctgaagtctttctccatggccaatggcctgaacgccaggatgatgcacggacgctcg
tattccctcactgccagcaatggtaacaagaggaacagcctgaagaaaaccaaaatgatt
ggtcctcctcagagcccatcacagagctgtgccaggaagagctgcaagatctcctag
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