Polyodon spathula (Mississippi paddlefish): 121296467
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Entry
121296467 CDS
T07273
Name
(RefSeq) protein sidekick-2-like
KO
K16353
protein sidekick
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pspa04515
]
121296467
Cell adhesion molecules [BR:
pspa04515
]
Immunoglobulin superfamily
Other
121296467
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
fn3
Ig_3
I-set
FN3_DSCAM-DSCAML_C
Ig_2
Pur_ac_phosph_N
ig
Fn3_VIN3
V-set
Ig_J_second
Tissue_fac
Ig_RIMBP2
Fn3_Dep-1_3rd
DUF4784_N
EphA2_TM
Motif
Other DBs
NCBI-GeneID:
121296467
NCBI-ProteinID:
XP_041078011
LinkDB
All DBs
Position
21:complement(27152160..27283967)
Genome browser
AA seq
2213 aa
AA seq
DB search
MSPACRTQAAGLARFWAVFGYSTGLKSSTSWILWLSLLFSSTRAQDDVPPYFKTEPVRSQ
LHLERNRLVLTCMAEGSWPLEFKWIHNNTELTRFSLEYRYMIPSLDRAHAGFYRCIVRNR
VGALMQRRTEVQVAYMGNFEDGERSQSVSQGEGAVIPAPRIHSLPQPQVTWFRDGRKIPP
SSRIAITLDNKLVILSTVAPDAGRYYVQAVNDKNGENKTSQPITLSVENVGGPADPIAPT
IIIPPRNTSVASGASEVTMECVANARPLIKLSIAWRKDGVLVTSGLSDFNRQLTILSPTV
HQSGHYECEAVLRSSSVPSVRAGAYLHVLEPPQFVKEPERHITAEMEKVVDIPCQARGVP
KPEILWFKDAVPISSLKIPRYRVLPGGTLQVNGLLPDDTGMFQCFARNQAGEVQTNTYLA
VTSISPNITAGPSDSTVIDGMSVILHCETSGAPRPAITWQKGERILASGSVQLPRFTLLE
SGSLLISPSHISDIGTYRCLATNSRGIDEANADLIVLARTRITSPPQDQSVIKGTKATMA
CGVTHDPSVTVRYVWEKEGSVIHANSIPRIRLDPDGTLHISQTWSGDIGTYTCHVTSVGG
NDSRSAHLRVRQLPHAPENPVAMLSSVERRAINLTWTKPFDGNSPLIRYILEVSENNAPW
TVLLANIEPESSAVTVSSLIPARSYQFRICAVNDVGKGQFSKETDRLSLPEEPPSGPPQN
VIASGRTNQSIMIQWQPPAESHQNGIIRGYVIRYCLSGLPVGYQYKNITNHDVNNLLLED
LIIWTNYEIEVAAYNEAGLGVYSHTVTEWTLQGVPTVAPGNVQAEAVNSTTIRFSWTAPS
PQFINGINQGYKLLAWEPGQEEEVTMVTVRPNFQDSIHVGYIKGLKKFTEYSTSVLCFTT
PGDGPRSTAQVLRTHEDIPGPVGHLSFTEILDTSLKVSWREPLEKNGILTGYRISWEEYN
RTNTRVTHYLPNVTLQYRVTGLTALTTYTIEVAAMTSQGQGQLSSSTISSGVPPELPGPP
TNMAISNIGPRSVTLQFKPGYDGKTSISRWQVEAQIAVIGENEEWVLLHQLPNEPDARSL
EVPNLNPYTFYRFRMRQVNIVGTSPSSQPSRKIQTLQAPPDIAPANVTLRTASETSLWLR
WVPLPEWEYNGNPEFVGYRVQYSRTGTEGRALTHRIPDRLEREFTIEDLEEWAEYEVRVQ
AVNGIGAGPWSQPVRGLTRESVPSSGPTNISAFATTSSSILVRWSEVPEPDRNGLVLGYK
VVYKEKDSDLPLQFWTAEGNTTHSLLLSDLGKYVLYEIKVLAFTRIGDGVPSNPPILERT
LDDVPGPPVGILFPEVRTTSVRLIWQSPAQPNGIILAYQITYRLNSTNSNTATVDVLNPS
ARQYTASGLKPELVYVFRITAQTRKGWGEAAEALVVTTEKRDRPQPTSSPTVRQEDVQAR
KVLLSWEPGSDGLSPVRYYTVQYRELPGSNWTVHSASVNHEASSYIVDRLKPFTSYQFRV
KSTNDIGDSEFSEESEAITTLQDAPDEAPVILSVTPHTTTSVLIRWQPPSEEHVNGILLG
FQIRYRELLYDGLRSFTVRTVNSHTATWAELTSPYSVRNLTESSLTQYELDNLSKHKRYE
IRLSVYNAVGEGPTSAPQEVFVGEAVPTGPPQNVAIQSATATQLDVTWDPPPVEAQNGDI
QGYKVFYWEFQRQNETERLKTLFLPEGGVKLKNLTGYTTYMISVAAFNAAGDGPRSTATR
GRTQQAAPSASSFIHFGELTTTSVNVSWGEPVYPNGIIEGYRLIYEPCTPVDGVSKSVTV
DIKGNSPLWMKIKDLADGVTYNFRIRAKTFTYGPEVEANITTGPGEGAPGPPGEPFISRY
GSALTIHWASGDPGRGPISRYVIEARPSDEGLWDILIKDIPKEVTSYTFNMDILKQGVSY
DFRVIGVNDYGYGSPSAPSPSISAQKVAPFYEEWWFLVVVALVGLIFILLLVFILIIRGQ
SKKYSKKSDSGNNSNCNALSHGEMVSLDEGRFPALELNNRRLSVKNSFCRKNGVYTRSPP
RPSPGSLHYSDEDISTKYNDLIPAENSSLTEKPSEISESQGSDSEYEVDQDRPKAHSFVN
HYISDPTYYNSWQRQQKGISRVQAYSYTESDSGEPEPSALPPPLPPLPPLPPQLNSVPKG
QGQGSLYRPKGSRTPTPQQQPSNPPSQNSTLYRPPSSLAPGSRAPIAGFSSFV
NT seq
6642 nt
NT seq
+upstream
nt +downstream
nt
atgtctccagcgtgccggacacaagctgctggtttagcccggttttgggcagtgtttggg
tattctaccgggctgaagtcgagtaccagctggattctatggctttccttgctgttctcc
tccacaagagctcaagatgacgtgcctccctatttcaagacggagcctgtgcgctctcaa
ctgcacctggagagaaacagactggtcctcacctgcatggcggagggcagctggccgctg
gagtttaagtggatccacaacaatacagagctcacccgcttctccctggagtacaggtat
atgatcccctcactggaccgtgcacacgccggcttctaccggtgcattgtacgaaaccgc
gtgggcgccctcatgcagaggagaactgaagtgcaagtggcctacatgggtaactttgag
gacggggagcgatcgcagagcgtatcccagggggagggtgcggttatccccgccccgcgg
atacacagcctcccccaaccgcaggttacctggttccgggacggacgcaagataccgccc
agcagccgaatagcaatcacgctggacaacaagctggtcatcctgtccacagtggctcca
gatgctggacgctactacgtgcaagcggtcaatgacaagaacggagagaacaagacgagc
cagccaatcacgctctccgtggagaacgtgggcggccccgctgatcccatcgcccccacc
atcatcattcccccccgcaacaccagcgtggcctcgggggcctctgaggtgaccatggag
tgcgttgccaacgccaggccccttatcaagctgagtatcgcatggcggaaggatggcgtc
ctggtgaccagtggtctgagtgactttaaccgccagctgaccatcctgagcccaacagtg
catcagtctggacactacgagtgcgaggctgtcctgcgcagcagcagtgtgccctcggtc
agagccggggcctacctccacgttctagagccgccccagtttgtgaaggagcccgagaga
cacatcactgcggagatggagaaggtggtggatatcccctgccaggcccgaggtgtgcca
aaaccagagatcctctggttcaaggatgcggtccctatcagctcactgaagattcctcga
taccgcgtgttgccgggtggcactctacaggtgaacgggctcctgcctgacgacaccgga
atgttccagtgcttcgcgcgtaaccaggccggagaagtgcagaccaacacctacctcgca
gtcaccagcatctccccgaacataacggcgggtccttctgacagcacagtgatcgacggc
atgtcagtgatcctgcactgcgagacctcgggagcaccccggccagccatcacctggcag
aaaggagagaggatcctggccagtggttcagtccagctcccccgcttcactctgctggag
tcgggcagtctgctcatcagcccctcccacatctcagatatcggcacctacaggtgccta
gcaaccaactcgcgaggtatcgacgaggcgaacgctgacctcatcgtcctggcacgaacc
cggatcacgagccccccccaggaccagagtgtcatcaagggaaccaaagctaccatggca
tgcggagtgacccacgaccccagcgtcaccgtcaggtacgtgtgggagaaggaaggctca
gtgatccacgccaactccatcccacgcatccgcctggaccccgacgggaccctgcatatc
tcccagacctggtccggagacattggcacgtacacgtgccacgtcacctccgtgggaggc
aatgactcccgcagtgcacacctccgagtcaggcagctccctcacgctcctgagaaccct
gtagcaatgctgagctcggtggagcggagagccatcaacctgacctggaccaagcccttc
gacgggaacagccccctcatccgctacatcctggaggtgtccgagaacaacgctccctgg
acggtgctgctggccaatatcgaacccgagtcctctgcagtaacggtcagcagcctcatc
ccggcccgctcgtaccagttcaggatctgtgcggtcaacgacgtggggaagggtcagttc
agcaaggagaccgacagactgtccctcccggaggagccccccagtggccccccacagaac
gtcatcgccagcggacgcaccaaccagtccatcatgatccagtggcagccgccggccgag
agccaccagaacggcattatccgtggatacgtgatacggtactgtctgtctgggttgccg
gtgggttatcaatataagaacatcaccaaccatgatgtgaacaacctgctcctggaggat
ctgatcatctggaccaactacgagattgaggttgcagcctacaatgaggctggactgggg
gtctacagccacactgtcaccgagtggaccctgcagggagtgcccacagtggccccgggg
aacgtccaagccgaggctgtgaactccaccaccatccgcttcagctggaccgcgcccagc
ccgcagttcatcaacggcatcaaccagggttacaagctgttggcatgggaaccaggtcaa
gaggaggaggttaccatggtgacggtgaggcctaacttccaggacagcatccatgtgggg
tacatcaaagggctgaagaagttcacagagtattccacctccgtgctgtgcttcaccact
ccaggggacgggcctcgcagcactgcccaggtcctgcgcacgcacgaggacatcccaggt
ccggtcggtcacctgagcttcactgagatcctggacacgtctctgaaagtgagctggagg
gagccgctcgagaagaacggcatcctcacagggtaccgcatctcctgggaggagtacaac
cgcaccaacacgcgcgtgactcactatctgcccaacgtgacgctgcagtaccgcgtgacg
ggcctcaccgccctcaccacctacactatcgaggtggcagccatgacctcccagggccag
gggcagctctcctcctccaccatctcttcaggggtccctccggagctgccgggccccccc
accaacatggcaatctccaacattggcccccgctcggtcaccctgcagttcaaaccgggc
tatgacggaaagacctctatctccaggtggcaggtggaggctcagatcgctgtcatcggt
gagaatgaagagtgggtcttgctgcaccagcttcccaatgagccggacgcccgctccctt
gaggtgccaaatctcaacccgtacaccttttacaggtttcgaatgcggcaggtcaacatc
gtgggcaccagcccctccagccagccctcccgcaagatccagaccctgcaggctccccct
gacattgcccccgccaacgtgaccctgcgcacggccagcgagaccagcctctggctgcga
tgggtgcccttgcctgagtgggagtacaatggcaacccagagtttgttgggtaccgggtg
cagtactcccgcacagggactgagggccgagcgctgacccacaggatcccagaccggctg
gagagggagttcaccatcgaggacctggaggagtgggcagagtacgaggtgcgcgtgcag
gcggtcaacggcatcggagctggaccctggagccagccagtccggggcctcactcgggag
tctgttccctccagtggccccaccaacatctctgccttcgccaccacctccagcagcatc
ctggttcgctggtctgaggtcccggaacccgacaggaacggacttgttctcggatacaag
gttgtgtacaaggagaaggactctgacttgcccctgcagttctggacagccgaggggaac
accacccacagcctcctgctcagcgacctggggaagtacgtcctgtatgagatcaaggtg
ctggcgttcacgcggatcggagatggggtacccagcaacccgcccatactggagaggacc
ctggacgatgtgcccggacccccagtggggattctgttccccgaggtcaggaccacctct
gtgaggctcatctggcagtcccctgcccagcccaatggcatcattctggcctaccagata
acttaccggctaaattcaaccaatagcaacacagctacggtagacgtgctgaaccccagt
gcgcggcagtacacagcgtccgggctcaaaccagagctggtgtacgtgttccgcatcaca
gctcagacgcggaaaggctggggggaggcggctgaggcactggtggtcaccactgagaag
agagaccggccccagcccaccagctcacccacagtcagacaggaggacgtgcaggcccgg
aaggtgctgttgtcgtgggaaccaggcagcgacggcctctccccggtccgctactatacc
gtccagtaccgagagctgccgggcagcaactggaccgtccactcagcctcggttaaccac
gaggccagctcttacatcgtggacaggctgaagcccttcacttcataccagttccgggtg
aaatcgaccaatgacatcggagacagcgagttcagcgaggagagtgaggcaatcaccacg
ctacaggacgccccggacgaagccccagtaatactgtctgtgacaccgcacactacaacc
tctgtgctgattcgctggcagcctccctcggaggagcatgtcaacggaatcctgctgggg
ttccagatccgataccgcgagctgctgtatgacggcctgcgcagcttcaccgtgaggacg
gtgaacagccacaccgcgacctgggcagagctgacctccccttacagtgtgcggaacctg
accgaatcctcactcacccaatatgagctggacaacctgagtaaacacaagcgctacgag
atccgactgagcgtctacaacgccgtgggggaggggccgaccagcgcgccgcaggaagtc
ttcgtgggagaggcggttcccactggtccaccacagaatgtggccatccaatcagcgacc
gcgacccagctcgacgtcacctgggacccgccccctgttgaggcgcagaatggagatatc
caggggtacaaggtcttctactgggagttccagcggcagaacgagacggagcgtctgaag
accctcttcctgccggagggcggggtgaagctgaagaacctgacggggtacaccacctac
atgatcagcgtggcggccttcaacgcggcaggggatggcccgcgcagcacggccacacgg
gggcgcactcagcaagcagctcccagtgcttccagtttcatccacttcggagagctcacc
accacctcggtcaacgtatcctggggggaacccgtctaccccaatggcatcatcgagggc
tatcggctcatctatgaaccctgcacccccgtcgatggagtgagtaagagcgtgacggtg
gatatcaaggggaactctcccctgtggatgaagatcaaggacctggcggacggggtcacc
tacaacttccgcattcgggccaagaccttcacatacggaccggaagtggaggccaacatc
accactggaccaggcgagggtgcccctggccctcccggggagcccttcatctctcgctat
ggctcagctctcactatccactgggcgagcggagaccccggaagaggccccatcagccgc
tacgtcatcgaggccagaccctcagatgagggactgtgggatatcctgatcaaggacatc
ccgaaggaagtgacatcatacaccttcaacatggacatcttgaagcagggggtgagctac
gacttccgggtcatcggggtcaacgactacggctatggctcccccagcgccccctccccc
tccatctccgcccagaaggtggcgcccttctatgaggagtggtggttcctggtggtggtg
gcactggtggggctcatctttatcctgctgctcgtattcatcctgatcatccgcgggcag
agcaagaagtactccaagaaatccgactcagggaataactcaaactgcaacgccctgagt
cacggagagatggtgagtctggatgagggacggttcccagcactggagctcaacaaccgg
aggctgtctgtgaagaactccttctgccgcaagaatggagtctacacgaggtctcctcct
cggcccagccctggcagcctgcattactctgacgaggacatcagcaccaaatacaatgac
ctgatcccagcagagaacagcagcttgacagagaaaccctccgagatctcagagtctcag
ggcagcgacagcgagtatgaggtagatcaagacagaccgaaggcacactccttcgtgaat
cactacatcagcgaccccacctactacaactcctggcagcgccagcagaagggcatctcc
cgggtgcaggcctacagctacacagagagcgattctggggagcctgagccctctgccctt
ccaccacccctccccccattgcctcccctccccccgcagctcaacagtgtccccaagggc
caggggcagggcagtctgtacagacccaagggcagccggactcccaccccccagcagcag
ccctccaacccccccagccagaacagcaccctctacaggccacccagcagtcttgctcct
ggatccagggctcccattgccggattctcgtcctttgtttga
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integrated database retrieval system
