Polyodon spathula (Mississippi paddlefish): 121296483
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Entry
121296483 CDS
T07273
Name
(RefSeq) tripartite motif-containing protein 16-like protein
KO
K12006
tripartite motif-containing protein 16 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121296483
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121296483
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
121296483
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-B_box
zf-RING_UBOX
ANCHR-like_BBOX
zf-C3HC4_4
zf-C3HC4_3
zf-C3HC4
Fib_alpha
zf-RING_5
RING_XB3-XBAT31
zf-RING_2
DUF4407
Zn_ribbon_8
Motif
Other DBs
NCBI-GeneID:
121296483
NCBI-ProteinID:
XP_041078034
LinkDB
All DBs
Position
21:27887458..27895886
Genome browser
AA seq
641 aa
AA seq
DB search
MADPKPEGTYEQLKCLICSKTFTCPVNLSCRHNFCKACLEERWDKVENEDSYSCPECRHT
FETRPKIQKDPLLNGMVAEPSNKEADEINTPPSEEKDKVLEQNEEVIEKKEGGTEKTDKV
IEKDKVIEKKDEEEDVVCDSCIETQSRAVKSCLTCLVSYCEVHLRPHLEKSKFQNHKLVE
PLRDIEGRTCEVHNMPLDLFCQEDWSCICQECIIEEHSGHKTAPSGEARKEVENELKQTQ
TELDKKVKAAETVINKLQTNATSIENSVQEVKVSIDQQFSELLEAVEKAKKETMEALDSE
ERSAVKQVEGIRAHLEQKRADLKKTHTKIEKMTKNKNDVPFLQEYSEWKKGVSDDTLPSV
YIELKDRLTSFSRVVSETSQVIQDELLSKFKNKLKELCKDDKCGIKTTVALICSPKHHIS
APEPKTRSDFLQYTSPVSFDPDTMHRYLRLTMDNHKVTNTAPWQHQYPDVPERFEHWRQV
LCVESFYLGRHYFEVDISGEGTHVGLTYKSIDRKGKESTSCITGNDFSWCLHWSNRDFSA
WHGDLETPVKAVGKFTRIGIYVDYARGSLAFYGVADSMTLIHKYQAEFTEPLYPAFWLSK
KENVVLLVSPGEVLPQKSPSPPPTPSSEAGAQTAQYHVYPI
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggcagaccccaaacctgaaggaacctacgagcagctgaaatgtcttatctgctcaaaa
acattcacgtgccctgtgaacctatcctgcaggcacaacttctgcaaggcctgcctggaa
gaacggtgggacaaagtggagaacgaggatagctacagctgcccggagtgccggcacacc
tttgaaaccagacccaaaattcaaaaggatcctctccttaatggaatggtggcagagccg
tcgaacaaagaggcagatgaaatcaacacacccccctctgaagagaaggacaaggtccta
gaacagaatgaagaggtcatagaaaagaaagaagggggcactgaaaagactgacaaggtc
atagagaaagacaaagtcatagagaaaaaggatgaggaagaggatgtggtctgcgactcc
tgcatcgagactcagtccagggctgtgaaatcctgcctcacctgcctggtctcttactgc
gaagtccatctgagacctcacctggagaagagcaagttccagaaccacaagctggtggag
ccgctgcgggacatcgagggccggacctgcgaggtccacaacatgcccctggatctcttc
tgccaggaggactggagctgcatatgtcaggagtgtataatcgaggagcacagcgggcac
aaaactgcaccctcaggggaagccaggaaggaggtggagaatgaactaaagcaaacacag
actgagctggacaagaaggtgaaggcagcagaaaccgttatcaacaaactgcagaccaac
gccacctccattgagaactcagtgcaggaagtgaaggtcagcattgaccagcagttctca
gagctgctggaggctgttgagaaggctaagaaggagacgatggaggccctggacagtgaa
gagcgctcagcagtgaagcaggtggagggcatcagggcacacctcgagcagaagcgtgca
gacctcaagaaaacccacaccaagattgagaagatgaccaagaacaagaatgatgttccc
ttcctccaagagtacagcgagtggaagaagggggtctccgatgacaccctacccagcgtc
tacattgagctgaaggacagactcacctccttcagcagagtggtgtctgagacctcgcag
gtcattcaggacgagctgctctccaaattcaagaacaagctcaaagagctctgcaaagat
gataaatgtggaattaaaaccacagtggctctaatctgctcccctaagcaccacatatca
gcccctgaaccgaagaccaggagcgatttcctacaatatacctccccggtgagctttgac
cctgacacaatgcaccggtacctgaggctgacaatggacaaccacaaagtgactaacacc
gccccttggcagcaccagtacccggacgtgccggagaggttcgagcactggcggcaggtg
ctgtgcgtggagagcttctacctgggccgccactatttcgaggtggatatcagcggagag
gggacccacgtggggctcacctacaagagcatcgaccgcaaggggaaggagagcaccagc
tgcatcaccggcaacgacttctcctggtgcctgcactggagcaacagggacttctcagcc
tggcacggcgacttggagacgcctgtcaaggccgttggcaagttcaccaggatcggcatc
tatgtagactacgctcggggaagcctggctttctacggcgttgctgactccatgactcta
atccacaagtaccaggcagagtttactgagccgctctatcctgccttctggctctccaag
aaagagaatgtggtgctgctggtgagccccggcgaggtgcttcctcagaagagcccgtca
ccccctccaaccccatcaagtgaagccggggcgcaaactgcacagtaccatgtttatcct
atttag
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integrated database retrieval system
