KEGG   Polyodon spathula (Mississippi paddlefish): 121296492
Entry
121296492         CDS       T07273                                 
Name
(RefSeq) splicing factor U2AF 65 kDa subunit-like
  KO
K12837  splicing factor U2AF 65 kDa subunit
Organism
pspa  Polyodon spathula (Mississippi paddlefish)
Pathway
pspa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pspa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    121296492
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pspa03041]
    121296492
Spliceosome [BR:pspa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    121296492
 Complex B
    121296492
SSDB
Motif
Pfam: RRM_1 RRM_occluded RRM_7 Transformer Zip
Other DBs
NCBI-GeneID: 121296492
NCBI-ProteinID: XP_041078049
LinkDB
Position
21:complement(22334831..22349803)
AA seq 469 aa
MSEFDEFEKQLSENRQERENEHHKKRSRSKSQSRSEKHRSWSKDRDSRSRDKKRHSRDRK
SKSRDIRSRSKEQKKHSYSPPRRSRKKRLCKYWDVPPPGFEHITPVQYKAMQAAGQIPSA
ALLVNSTVSGVAVTPTQVPTVGSQMTRQARRLYVGNIPFGVTEELMADFFNAQMRLAGLS
QAPGNPVLAVQINQDKNFAFLEFRSVDETTQAMAFDGIIFQLQSLKIRRPHDYQPLPGIA
EQPPLHVPGVVSTVVPDSPNKLFIGGLPNYLNDDQVKELLTSFGPLKAFNLVKDSATSLS
KGYAFCEYVDVSVTDQAAAGLNGMQLGDKKLIVQRASVGAKNANPSTIVQTLVTLQVPGL
QTFQNTGMPTEVLCLLNMVMPEELVEDDEYEEILEDIREECCKYGRVRSIEIPRPVDGLE
VPGCGKIFVEFVSPSECQKAMQALTGRKFANRVVVTKYYDPDMYHRREF
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgtcagaatttgatgagtttgagaagcagctaagcgaaaatcggcaggaaagagaaaat
gaacatcacaaaaaaagaagtcggagcaaatcgcaaagccgcagcgagaagcatcgcagt
tggagcaaggacagggacagtcgtagccgagacaaaaaacgacatagtcgggatcggaag
agtaagagcagagacatacggagcaggtcaaaggagcagaagaaacacagttactctcct
ccacgaaggtcccgaaagaaaagattgtgtaaatactgggatgttccacctccaggtttt
gaacacatcacaccagtgcagtacaaggctatgcaagctgcagggcagatccccagtgca
gctctgctggtaaactccacagttagcggagtagctgtcacccccacacaggtgccgaca
gttggcagtcagatgactcgacaggccagacgactctatgtgggaaatattccttttggt
gttacagaggagttaatggctgatttctttaatgctcaaatgcgtctcgctgggctatcg
caggcccctggcaacccggttcttgcagtccagattaaccaggataaaaactttgccttc
cttgaattccgttcagttgatgagactacacaggccatggcgtttgatgggataatattc
cagcttcagtctttaaagatccggagacctcatgactaccagcctttaccagggattgca
gaacaaccccctcttcatgtcccaggtgttgtctccacagttgttccagattctccaaac
aagcttttcatcggtggtttacccaattacctcaatgacgatcaggtaaaggagcttttg
acgtcatttggtcctcttaaagcgttcaacttggtgaaggacagtgcaacatcattgtct
aaaggttatgccttttgtgaatatgttgatgtcagtgttactgaccaggcagctgcagga
ctgaatggcatgcagctcggagacaaaaagctaatagtacagcgagcaagtgtgggggct
aagaatgctaatccgagtacaatcgttcagaccctagtaactttgcaagtaccaggccta
cagactttccaaaacacaggaatgccaacagaagtgctctgcctgttaaatatggtaatg
cctgaggagctggtggaggatgatgagtatgaagagattttagaagatattcgtgaagag
tgctgcaaatatggacgagtccggtctatcgaaatcccacggccagtcgatggtcttgaa
gtgccaggctgtggcaagatctttgtggagtttgtttcaccttcagaatgccagaaagcc
atgcaagcgctcactggccgaaaatttgctaatagagtggttgttacaaaatactatgat
ccagatatgtatcacagacgtgaattctaa

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