Polyodon spathula (Mississippi paddlefish): 121296555
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Entry
121296555 CDS
T07273
Name
(RefSeq) E3 ubiquitin-protein ligase SIAH1 isoform X1
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
pspa
Polyodon spathula (Mississippi paddlefish)
Pathway
pspa04115
p53 signaling pathway
pspa04120
Ubiquitin mediated proteolysis
pspa04137
Mitophagy - animal
pspa04310
Wnt signaling pathway
Brite
KEGG Orthology (KO) [BR:
pspa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
121296555
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
121296555
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
121296555
09143 Cell growth and death
04115 p53 signaling pathway
121296555
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pspa04121
]
121296555
Enzymes [BR:
pspa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
121296555
Ubiquitin system [BR:
pspa04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
121296555
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
Motif
Other DBs
NCBI-GeneID:
121296555
NCBI-ProteinID:
XP_041078185
LinkDB
All DBs
Position
21:complement(100517..108369)
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AA seq
315 aa
AA seq
DB search
MTGKDTLHCLYSWKGVLELFTCLSGNKASKSKEMSRQTATALPTGTSKCAPSQRVPALQG
TTASNNDLASLFECPVCFDYVLPPILQCQSGHLVCSNCRPKLTCCPTCRGPLGSIRNLAM
EKVANSVLFPCKYASSGCEITLPHTEKADHEELCEFRPYSCPCPGASCKWQGSLDAVMPH
LMHQHKSITTLQGEDIVFLATDINLPGAVDWVMMQSCFGFHFMLVLEKQEKYDGHQQFFA
IVQLIGTRKQAENFAYRLELNGHRRRLTWEATPRSIHEGIATAIMNSDCLVFDTSIAQLF
AENGNLGINVTISMC
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgacgggtaaagacacattacattgtctgtactcatggaaaggagtccttgaactgttt
acatgcctatcaggaaacaaagcaagcaaaagtaaagaaatgagtcgccagactgccaca
gcactcccaacaggtacatcgaagtgtgctccgtcacagagggtgcctgcgctgcagggc
accacagcttccaacaatgacttggccagtctctttgagtgtcctgtctgttttgactat
gtactgccacccattcttcagtgccagagcgggcatcttgtttgcagcaactgtcgccca
aagctcacatgctgtccaacatgtcgaggcccactgggctccattcggaacctggctatg
gaaaaggtggccaactctgtactgtttccttgtaaatacgcctcttcaggatgtgagata
acgttgccacacacagagaaagcggaccacgaagagctttgcgagttcaggccttattct
tgcccttgtcctggagcctcgtgtaaatggcagggctccctggatgctgtcatgcctcat
ttgatgcatcaacacaagtctataacaacgttacaaggggaagacattgtctttctggcc
acagacattaatcttccaggagcagtcgactgggttatgatgcagtcctgttttgggttc
cactttatgttggtcttggagaaacaggagaaatatgatggccaccagcagttctttgct
atcgtccagttgattggaacacgcaagcaggcagaaaactttgcctaccgactcgagctg
aacggtcatcgccggcggctgacctgggaagcaacgcctcgctcaatccacgaggggatc
gccactgcgatcatgaacagcgactgtctggttttcgacactagcattgcacagcttttt
gcagagaatggaaatctaggcataaacgttacaatctcaatgtgctga
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